Selected-GenAtlas references SOURCE GeneCards NCBI Gene Swiss-Prot Orphanet Ensembl
HGNC UniGene Nucleotide OMIM UCSC
Home Page
FLASH GENE
Symbol HOXD10 contributors: npt/mct - updated : 17-12-2009
HGNC name homeobox D10
HGNC id 5133
DNA
TYPE functioning gene
SPECIAL FEATURE arranged in tandem, component of a cluster
STRUCTURE 3.18 kb     2 Exon(s)
10 Kb 5' upstream gene genomic sequence study
MAPPING cloned Y linked N status confirmed
Map see HOXD@
Physical map
KIAA1715 2q31 KIAA1715 LOC344191 2q31.2 similar to Homeobox even-skipped homolog protein 2 (EVX-2) HOXD13 2q31 homeo box D13 HOXD12 2q31 homeo box D12 HOXD11 2q31.1 homeo box D11 HOXD10 2q31 homeo box D10 HOXD9 2q31 homeo box D9 HOXD8 2q31 homeo box D8 HOXD4 2q31 homeo box D4 HOXD3 2q31 homeo box D3 HOXD1 2q31-q37 homeo box D1 LOC150978 2q31.2 similar to 60S acidic ribosomal protein P1 LOC129841 2q31.2 similar to 40S ribosomal protein SA (P40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) MTX2 2q24.3-q31 metaxin 2
RNA
TRANSCRIPTS type messenger
identificationnb exonstypebpproduct
ProteinkDaAAspecific expressionYearPubmed
2 - 1814 - 340 - Redline (1992)
EXPRESSION
Type
   expressed in (based on citations)
organ(s)
SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
 reproductive tract   predominantly
Nervousbrain    
Reproductivefemale systemuterus  highly
cell lineage
cell lines
fluid/secretion
at STAGE
physiological period embryo
Text developing limb buds
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
  • N-terminal portion of the activation domain contains several consensus sequence elements also found in other mammalian AbdB family genes
  • helix-turn-helix, DNA binding domain
  • HOMOLOGY
    interspecies homolog to murine Hox-4.5
    Homologene
    FAMILY
  • Abd-B homeobox family
  • CATEGORY transcription factor
    SUBCELLULAR LOCALIZATION     intracellular
    intracellular,nucleus
    basic FUNCTION
  • playing a role in limb morphogenesis
  • may play a continuing role in adult genitourinary tract function (Redline 1992)
  • has tumor-suppressive functions for mammary epithelial cells (Carrio 2005)
  • positively regulating microRNA-7 (miR-7) (Reddy 2008)
  • CELLULAR PROCESS nucleotide, transcription
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein interacting with HOXD9 (cross-regulatory interactions between these genes might be essential for their proper expression) (Zappavigna 1991)
    cell & other
    REGULATION
    repressed by HOXD11 (HOXD11 suppresses the expression of HOXD10 and the retinoic acid synthetic enzyme, retinaldehyde dehydrogenase 2 RALDH2) (Misra 2009)
    ASSOCIATED DISORDERS
    corresponding disease(s) PSDY2 , CVT
    Susceptibility isolated congenital vertical talus
    Variant & Polymorphism other M319K mutation in a family with isolated congenital vertical talus (Dobbs 2006)
    Candidate gene
    Marker
    Therapy target
    ANIMAL & CELL MODELS