| 1 | BTAF1, TBP
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| TATA-Box Binding Protein O-GlcNAcylation at T114 Regulates Formation of the B-TFIID Complex and Is Critical for Metabolic Gene Regulation.
|
| Hardivillé S, Banerjee PS, Selen Alpergin ES, Smith DM, Han G, Ma J, Talbot CC Jr, Hu P, Wolfgang MJ, Hart GW.
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| Mol Cell. Mar 5;77(5):1143-1152.e7. doi: 10.1016/j.molcel.2019.11.022. Epub 2019 Dec 19 2020
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| 2 | TBAF1, TBP
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| Conformational changes and catalytic inefficiency associated with Mot1-mediated TBP-DNA dissociation.
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| Heiss G, Ploetz E, Voith von Voithenberg L, Viswanathan R, Glaser S, Schluesche P, Madhira S, Meisterernst M, Auble DT, Lamb DC.
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| Nucleic Acids Res. Apr 8;47(6):2793-2806. doi: 10.1093/nar/gky1322 2019
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| 3 | TAF6, TAF9, TBP, TCP1
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| Chaperonin CCT checkpoint function in basal transcription factor TFIID assembly.
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| Antonova SV, Haffke M, Corradini E, Mikuciunas M, Low TY, Signor L, van Es RM, Gupta K, Scheer E, Vos HR, Tora L, Heck AJR, Timmers HTM, Berger I.
|
| Nat Struct Mol Biol. Dec;25(12):1119-1127. doi: 10.1038/s41594-018-0156-z. Epub 2018 Dec 3 2018
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| 4 | TBP
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| A stable mode of bookmarking by TBP recruits RNA polymerase II to mitotic chromosomes.
|
| Teves SS, An L, Bhargava-Shah A, Xie L, Darzacq X, Tjian R.
|
| Elife Jun 25;7:e35621. doi: 10.7554/eLife.35621 2018
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| 5 | TBP
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| Leading role of TBP in the Establishment of Complexity in Eukaryotic Transcription Initiation Systems.
|
| Kawakami E, Adachi N, Senda T, Horikoshi M.
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| Cell Rep. Dec 26;21(13):3941-3956. doi: 10.1016/j.celrep.2017.12.034 2017
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| 6 | TBP
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| Elevated TATA-binding protein expression drives vascular endothelial growth factor expression in colon cancer.
|
| Johnson SAS, Lin JJ, Walkey CJ, Leathers MP, Coarfa C, Johnson DL.
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| Oncotarget Jul 25;8(30):48832-48845. doi: 10.18632/oncotarget.16384 2017
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| 7 | BTAF1, TBP
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| Molecular Mechanism of Mot1, a TATA-binding Protein (TBP)-DNA Dissociating Enzyme.
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| Viswanathan R, True JD, Auble DT.
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| J Biol Chem. Jul 22;291(30):15714-26. doi: 10.1074/jbc.M116.730366. Epub 2016 Jun 2 2016
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| 8 | TBP
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| Affinity and competition for TBP are molecular determinants of gene expression noise.
|
| Ravarani CN, Chalancon G, Breker M, de Groot NS, Babu MM.
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| Nat Commun. Feb 2;7:10417. doi: 10.1038/ncomms10417 2016
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| 9 | AFF1, TAF1A, TAF1B, TAF1C, TBP
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| TBP loading by AF4 through SL1 is the major rate-limiting step in MLL fusion-dependent transcription.
|
| Okuda H, Takahashi S, Takaori-Kondo A, Yokoyama A.
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| Cell Cycle. Oct 17;15(20):2712-22. doi: 10.1080/15384101.2016.1222337. Epub 2016 Aug 26 2016
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| 10 | HUWE1, TBP
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| A specific E3 ligase/deubiquitinase pair modulates TBP protein levels during muscle differentiation.
|
| Li L, Martinez SS, Hu W, Liu Z, Tjian R.
|
| Elife Sep 22;4:e08536. doi: 10.7554/eLife.08536 2015
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| 11 | GATA2, MAOA, SP1, TBP
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| Molecular mechanism of monoamine oxidase A gene regulation under inflammation and ischemia-like conditions: key roles of the transcription factors GATA2, Sp1 and TBP.
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| Gupta V, Khan AA, Sasi BK, Mahapatra NR.
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| J Neurochem. Jul;134(1):21-38. doi: 10.1111/jnc.13099. Epub 2015 Apr 16 2015
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| 12 | SUPT20H, TAF9, TBP
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| The TAF9 C-terminal conserved region domain is required for SAGA and TFIID promoter occupancy to promote transcriptional activation.
|
| Saint M, Sawhney S, Sinha I, Singh RP, Dahiya R, Thakur A, Siddharthan R, Natarajan K.
|
| Mol Cell Biol. May;34(9):1547-63. doi: 10.1128/MCB.01060-13. Epub 2014 Feb 18 2014
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| 13 | SCA17, TBP
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| Deactivation of TBP contributes to SCA17 pathogenesis.
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| Hsu TC, Wang CK, Yang CY, Lee LC, Hsieh-Li HM, Ro LS, Chen CM, Lee-Chen GJ, Su MT.
|
| Hum Mol Genet. Dec 20;23(25):6878-93. doi: 10.1093/hmg/ddu410. Epub 2014 Aug 7 2014
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| 14 | TBP
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| The conformational state of the nucleosome entry-exit site modulates TATA box-specific TBP binding.
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| Hieb AR, Gansen A, Böhm V, Langowski J.
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| Nucleic Acids Res. Jul;42(12):7561-76. doi: 10.1093/nar/gku423. Epub 2014 May 14 2014
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| 15 | TAF4, TBP
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| A TAF4 coactivator function for E proteins that involves enhanced TFIID binding.
|
| Chen WY, Zhang J, Geng H, Du Z, Nakadai T, Roeder RG.
|
| Genes Dev 27(14):1596-609. doi: 10.1101/gad.216192.113.
2013
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| 16 | GTF2B, TBP
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| Genomic organization of human transcription initiation complexes.
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| Venters BJ, Pugh BF.
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| Nature 502(7469):53-8. doi: 10.1038/nature12535. Epub 2013 Sep 18.
2013
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| 17 | TBP
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| Human TFIID binds to core promoter DNA in a reorganized structural state.
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| Cianfrocco MA, Kassavetis GA, Grob P, Fang J, Juven-Gershon T, Kadonaga JT, Nogales E.
|
| Cell 152(1-2):120-31. doi: 10.1016/j.cell.2012.12.005.
2013
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| 18 | HIST3H3, TAF3, TBP, TP53
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| H3K4me3 interactions with TAF3 regulate preinitiation complex assembly and selective gene activation.
|
| Lauberth SM, Nakayama T, Wu X, Ferris AL, Tang Z, Hughes SH, Roeder RG.
|
| Cell 152(5):1021-36. doi: 10.1016/j.cell.2013.01.052.
2013
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| 19 | TAF3, TBP
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| Multivalent engagement of TFIID to nucleosomes.
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| van Nuland R, Schram AW, van Schaik FM, Jansen PW, Vermeulen M, Marc Timmers HT.
|
| PLoS One 8(9):e73495. doi: 10.1371/journal.pone.0073495. eCollection 2013.
2013
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| 20 | BTAF1, TBP
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| Mot1 redistributes TBP from TATA-containing to TATA-less promoters.
|
| Zentner GE, Henikoff S.
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| Mol Cell Biol. Dec;33(24):4996-5004. doi: 10.1128/MCB.01218-13. Epub 2013 Oct 21Dec;33(24):4996-5004. doi: 10.1128/MCB.01218-13. Epub 2013 Oct 2013
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| 21 | NFYA, SCA17, TBP
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| Role of the CCAAT-binding protein NFY in SCA17 pathogenesis.
|
| Lee LC, Chen CM, Wang HC, Hsieh HH, Chiu IS, Su MT, Hsieh-Li HM, Wu CH, Lee GC, Lee-Chen GJ, Lin JY.
|
| PLoS One 7(4):e35302. doi: 10.1371/journal.pone.0035302. Epub 2012 Apr 17.
2012
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| 22 | BTAF1, TBP
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| Interconversion between active and inactive TATA-binding protein transcription complexes in the mouse genome.
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| Choukrallah MA, Kobi D, Martianov I, Pijnappel WW, Mischerikow N, Ye T, Heck AJ, Timmers HT, Davidson I.
|
| Nucleic Acids Res. Feb;40(4):1446-59. doi: 10.1093/nar/gkr802. Epub 2011 Oct 19 2012
|
| 23 | BTAF1, TBP
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| Structure and mechanism of the Swi2/Snf2 remodeller Mot1 in complex with its substrate TBP.
|
| Wollmann P, Cui S, Viswanathan R, Berninghausen O, Wells MN, Moldt M, Witte G, Butryn A, Wendler P, Beckmann R, Auble DT, Hopfner KP.
|
| Nature 475(7356):403-7. doi: 10.1038/nature10215.
2011
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| 24 | SCA17, TBP
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| Neuroprotective effects of granulocyte-colony stimulating factor in a novel transgenic mouse model of SCA17.
|
| Chang YC, Lin CY, Hsu CM, Lin HC, Chen YH, Lee-Chen GJ, Su MT, Ro LS, Chen CM, Hsieh-Li HM.
|
| J Neurochem 118(2):288-303. doi: 10.1111/j.1471-4159.2011.07304.x. Epub 2011 Jun 2.
2011
|
| 25 | BRF1, TBP
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| Alcohol induces RNA polymerase III-dependent transcription through c-Jun by co-regulating TATA-binding protein (TBP) and Brf1 expression.
|
| Zhong S, Machida K, Tsukamoto H, Johnson DL.
|
| J Biol Chem 286(4):2393-401. doi: 10.1074/jbc.M110.192955. Epub 2010 Nov 24.
2011
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| 26 | BTAF1, DR1, TBP
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| Chromatin interaction of TATA-binding protein is dynamically regulated in human cells.
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| de Graaf P, Mousson F, Geverts B, Scheer E, Tora L, Houtsmuller AB, Timmers HT.
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| J Cell Sci 123(Pt 15):2663-71. Epub 2010 Jul 13.
2010
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| 27 | SCA17, TBP
|
| SCA17 repeat expansion: mildly expanded CAG/CAA repeat alleles in neurological disorders and the functional implications.
|
| Chen CM, Lee LC, Soong BW, Fung HC, Hsu WC, Lin PY, Huang HJ, Chen FL, Lin CY, Lee-Chen GJ, Wu YR.
|
| Clin Chim Acta 411(5-6):375-80. doi: 10.1016/j.cca.2009.12.002. Epub 2009 Dec 11.
2010
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| 28 | TBP
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| A splice variant of the TATA-box binding protein encoding the polyglutamine-containing N-terminal domain that accumulates in Alzheimer's disease.
|
| Reid SJ, Whittaker DJ, Greenwood D, Snell RG.
|
| Brain Res 1268:190-9. Epub 2009 Mar 12.
2009
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| 29 | SCA17, TBP
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| Spinocerebellar ataxia type 17 mutation as a causative and susceptibility gene in parkinsonism.
|
| Kim JY, Kim SY, Kim JM, Kim YK, Yoon KY, Kim JY, Lee BC, Kim JS, Paek SH, Park SS, Kim SE, Jeon BS.
|
| Neurology 72(16):1385-9.
2009
|
| 30 | TAF12, TAF4, TAF4B, TBP
|
| TAF4/4b x TAF12 displays a unique mode of DNA binding and is required for core promoter function of a subset of genes.
|
| Gazit K, Moshonov S, Elfakess R, Sharon M, Mengus G, Davidson I, Dikstein R.
|
| J Biol Chem 284(39):26286-96. doi: 10.1074/jbc.M109.011486. Epub 2009 Jul 27.
2009
|
| 31 | TBp
|
| TATA-binding protein recognition and bending of a consensus promoter are protein species dependent.
|
| Whittington JE, Delgadillo RF, Attebury TJ, Parkhurst LK, Daugherty MA, Parkhurst LJ.
|
| Biochemistry 47(27):7264-73. Epub 2008 Jun 14.
2008
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| 32 | TBP
|
| Polyglutamine expansion reduces the association of TATA-binding protein with DNA and induces DNA binding-independent neurotoxicity.
|
| Friedman MJ, Wang CE, Li XJ, Li S.
|
| J Biol Chem 283(13):8283-90. Epub 2008 Jan 24.
2008
|
| 33 | BTAF1, DR1, TBP
|
| TBP, Mot1, and NC2 establish a regulatory circuit that controls DPE-dependent versus TATA-dependent transcription.
|
| Hsu JY, Juven-Gershon T, Marr MT 2nd, Wright KJ, Tjian R, Kadonaga JT.
|
| Genes Dev 22(17):2353-8. Epub 2008 Aug 14.
2008
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| 34 | TAF4B, TBP
|
| Structural changes in TAF4b-TFIID correlate with promoter selectivity.
|
| Liu WL, Coleman RA, Grob P, King DS, Florens L, Washburn MP, Geles KG, Yang JL, Ramey V, Nogales E, Tjian R.
|
| Mol Cell 29(1):81-91. doi: 10.1016/j.molcel.2007.11.003.
2008
|
| 35 | SCA17, TBP
|
| Repeat expansion in spinocerebellar ataxia type 17 alleles of the TATA-box binding protein gene: an evolutionary approach.
|
| Tomiuk J, Bachmann L, Bauer C, Rolfs A, Schols L, Roos C, Zischler H, Schuler MM, Bruntner S, Riess O, Bauer P.
|
| Eur J Hum Genet 15(1):81-7. Epub 2006 Oct 11. 2007
|
| 36 | CDX1, TBP
|
| Functional interaction between the homeoprotein CDX1 and the transcriptional machinery containing the TATA-binding protein.
|
| Calon A, Gross I, Davidson I, Kedinger M, Duluc I, Domon-Dell C, Freund JN.
|
| Nucleic Acids Res 35(1):175-85. Epub 2006 Dec 7. 2007
|
| 37 | SCA17, TBP
|
| Anticipation and intergenerational repeat instability in spinocerebellar ataxia type 17.
|
| Rasmussen A, De Biase I, Fragoso-Benítez M, Macías-Flores MA, Yescas P, Ochoa A, Ashizawa T, Alonso ME, Bidichandani SI.
|
| Ann Neurol 61(6):607-10.
2007
|
| 38 | SCA17, TBP
|
| Eye movement abnormalities in spinocerebellar ataxia type 17 (SCA17).
|
| Hübner J, Sprenger A, Klein C, Hagenah J, Rambold H, Zühlke C, Kömpf D, Rolfs A, Kimmig H, Helmchen C.
|
| Neurology 69(11):1160-8.
2007
|
| 39 | TBP
|
| Repeat expansion in spinocerebellar ataxia type 17 alleles of the TATA-box binding protein gene: an evolutionary approach.
|
| Tomiuk J, Bachmann L, Bauer C, Rolfs A, Schöls L, Roos C, Zischler H, Schuler MM, Bruntner S, Riess O, Bauer P.
|
| Eur J Hum Genet 15(1):81-7. Epub 2006 Oct 11. Erratum in: Eur J Hum Genet. 2008 May;16(5):661.
2007
|
| 40 | GTF2A1, TBP
|
| TFIIA changes the conformation of the DNA in TBP/TATA complexes and increases their kinetic stability.
|
| Hieb AR, Halsey WA, Betterton MD, Perkins TT, Kugel JF, Goodrich JA.
|
| J Mol Biol 372(3):619-32. Epub 2007 Jun 29.PMID: 17681538 2007
|
| 41 | TAF1, TAF4, TBP
|
| TAF4 nucleates a core subcomplex of TFIID and mediates activated transcription from a TATA-less promoter.
|
| Wright KJ, Marr MT 2nd, Tjian R.
|
| Proc Natl Acad Sci U S A 103(33):12347-52. Epub 2006 Aug 8. 2006
|
| 42 | TBP, DEL6QD
|
| TBP as a candidate gene for mental retardation in patients with subtelomeric 6q deletions.
|
| Rooms L, Reyniers E, Scheers S, van Luijk R, Wauters J, Van Aerschot L, Callaerts-Vegh Z, D'Hooge R, Mengus G, Davidson I, Courtens W, Kooy RF.
|
| Eur J Hum Genet 14(10):1090-6. Epub 2006 Jun 14. 2006
|
| 43 | FXN, FRDA, FRAXA, FMR1, FRAXE, ATXN1, SCA1, ATXN2, SCA2, ATXN3, MJD, ATXN7, SCA7, SCA6, CACNA1A, SCA17, TBP, DRPLA, ATN1, AR, SBMA, DM1, DMPK, DM2, CNBP, SCA10, ATXN10, SCA12, PPP2R2B, SCA8, ATXN8OS
|
| Diseases of unstable repeat expansion: mechanisms and common principles.
|
| Gatchel JR, Zoghbi HY.
|
| Nat Rev Genet 6(10):743-55. Review. 2005
|
| 44 | SCA17, TBP
|
| Small de novo duplication in the repeat region of the TATA-box-binding protein gene manifest with a phenotype similar to variant Creutzfeldt-Jakob disease.
|
| Shatunov A, Fridman EA, Pagan FI, Leib J, Singleton A, Hallett M, Goldfarb LG.
|
| Clin Genet 66(6):496-501. 2004
|
| 45 | ZNF76, PIAS1, TBP
|
| ZNF76, a novel transcriptional repressor targeting TATA-binding protein, is modulated by sumoylation.
|
| Zheng G, Yang YC.
|
| J Biol Chem 279(41):42410-21. Epub 2004 Jul 26. 2004
|
| 46 | TBP
|
| Association of a CAG/CAA repeat sequence in the TBP gene with type I diabetes.
|
| Owerbach D, Pina L, Gabbay KH.
|
| Biochem Biophys Res Commun 323(3):865-9. 2004
|
| 47 | NRL,TBP
|
| The minimal transactivation domain of the basic motif-leucine zipper transcription factor NRL interacts with TATA-binding protein.
|
| Friedman JS, Khanna H, Swain PK, Denicola R, Cheng H, Mitton KP, Weber CH, Hicks D, Swaroop A.
|
| J Biol Chem 279(45):47233-41. Epub 2004 Aug 24. 2004
|
| 48 | SCA17, TBP
|
| SCA17 caused by homozygous repeat expansion in TBP due to partial isodisomy 6.
|
| Zuhlke CH, Spranger M, Spranger S, Voigt R, Lanz M, Gehlken U, Hinrichs F, Schwinger E.
|
| Eur J Hum Genet 11(8):629-32. 2003
|
| 49 | PDCD2, PSMB1, TBP
|
| Transcriptional Regulation of the Human TATA Binding Protein Gene.
|
| Harland L, Crombie R, Anson S, deBoer J, Ioannou PA, Antoniou M.
|
| Genomics 79(4):479-82. 2002
|
| 50 | ASF1A, TBP
|
| Identification and characterization of CIA/ASF1 as an interactor of bromodomains associated with TFIID.
|
| Chimura T, Kuzuhara T, Horikoshi M.
|
| Proc Natl Acad Sci U S A 99(14):9334-9. 2002
|
| 51 | TBP
|
| Mapping histone fold TAFs within yeast TFIID.
|
| Leurent C, Sanders S, Ruhlmann C, Mallouh V, Weil PA, Kirschner DB, Tora L, Schultz P.
|
| EMBO J 21(13):3424-33. 2002
|
| 52 | TBP
|
| Different types of repeat expansion in the TATA-binding protein gene are associated with a new form of inherited ataxia.
|
| Zuhlke C, Hellenbroich Y, Dalski A, Kononowa N, Hagenah J, Vieregge P, Riess O, Klein C, Schwinger E.
|
| Eur J Hum Genet 9(3):160-4. 2001
|
| 53 | SCA17, TBP
|
| SCA17, a novel autosomal dominant cerebellar ataxia caused by an expanded polyglutamine in TATA-binding protein.
|
| Nakamura K, Jeong SY, Uchihara T, Anno M, Nagashima K, Nagashima T, Ikeda S, Tsuji S, Kanazawa I.
|
| Hum Mol Genet 10(14):1441-8. 2001
|
| 54 | SCA17, TBP
|
| CAG repeat expansion in the TATA box-binding protein gene causes autosomal dominant cerebellar ataxia.
|
| Fujigasaki H, Martin JJ, De Deyn PP, Camuzat A, Deffond D, Stevanin G, Dermaut B, Van Broeckhoven C, Durr A, Brice A.
|
| Brain 124(Pt 10):1939-47. 2001
|
| 55 | TBP
|
| A neurological disease caused by an expanded CAG trinucleotide repeat in the TATA-binding protein gene: a new polyglutamine disease?
|
| Koide R, et al.
|
| Hum Mol Genet 8(11):2047-53 1999
|
| 56 | TAF1, TAF2AL, TAF4, TAF5, TAF6, TAF7, TAF9, TAF2GL, TAF11, TAF12, TAF2M, TBP
|
| Genomics and transcription analysis of human TFIID.
|
| Purrello M, et al.
|
| Oncogene 16 : 1633-1638. 1998
|
| 57 | TBP, PSMA2, PSMB1
|
| Linkage of TATA-binding protein and proteasome subunit C5 genes in mice and humans reveals synteny conserved between mammals and invertebrates.
|
| Trachtulec Z, Hamvas RM, Forejt J, Lehrach HR, Vincek V, Klein J.
|
| Genomics 44(1):1-7. 1997
|
| 58 | LEF1, SRY, TBP
|
| Architectural transcription factors : proteins that remodel DNA.
|
| Werner MH, et al.
|
| Cell 88 : 733-736. 1997
|
| 59 | TBP
|
| Genomic structure of the human TATA-box-binding protein (GTF2D). (Intron/exon; promoter; HeLa cells; internal donor site; phage lambda vector; transcription factor).
|
| Chalut C, et al.
|
| Gene 161 : 277-282. 1995
|
| 60 | TBP
|
| Mapping of the human TATA-binding protein gene (TBP) to chromosome 6qter.
|
| Rosen DR, et al.
|
| Cytogenet Cell Genet 69 : 279-280. 1995
|
| 61 | GTF2B, GTF2E1, GTF2E2, TBP, GTF2H1, GTF2F1
|
| Genes encoding general initiation factors for RNA polymerase II transcription are dispersed in the human genome.
|
| Heng HHQ, et al.
|
| Hum Mol Genet 3 : 61-64. 1994
|
| 62 | TBP
|
| The gene for the TATA binding protein (TBP) that contains a highly polymorphic protein coding CAG repeat maps to 6q27.
|
| Imbert G, et al.
|
| Genomics 21 : 667-668. 1994
|
| 63 | TBP
|
| Physical mapping at 6q27 of the locus for the TATA box-binding protein, the DNA-binding subunit of TFIID and a component of SL1 and TFIIIB, strongly suggests that it is single copy in the human genome.
|
| Purrello M, et al.
|
| Genomics 22 : 94-100. 1994
|
| 64 | TBP
|
| Direct mapping of the human TATA box-binding protein (TBP) gene to 6q27 by fluorescence in situ hybridization.
|
| Saito F, et al.
|
| Jpn J Hum Genet 39 : 421-425. 1994
|
| 65 | POMC, TBP
|
| Cryptic repeating triplets of purines and pyrimidines (cRRY(i)) are frequent and polymorphic : analysis of coding cRRY(i) in the proopiomelanocortin (POMC) and TATA-binding protein (GTF2D) genes.
|
| Gostout B, et al.
|
| Am J Hum Genet 52 : 1182-1190. 1993
|
| 66 | TBP
|
| Trinucleotide repeat polymorphism at the human transcription factor IID gene.
|
| Polymeropoulos MH, et al.
|
| Nucleic Acids Res 19 : 4307. 1991
|
| 67 | TBP
|
| Cloning of a transcriptionally active human TATA binding factor.
|
| Kao CC, et al.
|
| Science 248 : 1646-1650. 1990
|