| 1 | CDCA7, DNMT3B, HELLS, ICF1, ICF2, ICF3, ICF4, ZBTB24
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| CDCA7 and HELLS mutations undermine nonhomologous end joining in centromeric instability syndrome.
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| Unoki M, Funabiki H, Velasco G, Francastel C, Sasaki H.
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| J Clin Invest 129(1):78-92. doi: 10.1172/JCI99751. Epub 2018 Nov 19.
2019
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| 2 | CECR2, DNMT3B, SMARCA4
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| Elevated H3K79 homocysteinylation causes abnormal gene expression during neural development and subsequent neural tube defects.
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| Zhang Q, Bai B, Mei X, Wan C, Cao H, Dan Li, Wang S, Zhang M, Wang Z, Wu J, Wang H, Huo J, Ding G, Zhao J, Xie Q, Wang L, Qiu Z, Zhao S, Zhang T.
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| Nat Commun 9(1):3436. doi: 10.1038/s41467-018-05451-7.
2018
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| 3 | CDCA7, DNMT3B, HELLS, ICF1, ICF2, ICF3, ICF4, ZBTB24
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| Three Types of Immunodeficiency, Centromeric Instability, and Facial Anomalies (ICF) Syndrome Identified by Whole-Exome Sequencing in Saudi Hypogammaglobulinemia Patients: Clinical, Molecular, and Cytogenetic Features.
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| Alghamdi HA, Tashkandi SA, Alidrissi EM, Aledielah RD, AlSaidi KA, Alharbi ES, Habazi MK, Alzahrani MS.
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| J Clin Immunol 38(8):847-853. doi: 10.1007/s10875-018-0569-9. Epub 2018 Dec 3. No abstract available.
2018
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| 4 | DNMT3B, ZBTB24
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| ZBTB24 is a transcriptional regulator that coordinates with DNMT3B to control DNA methylation.
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| Thompson JJ, Kaur R, Sosa CP, Lee JH, Kashiwagi K, Zhou D, Robertson KD.
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| Nucleic Acids Res 46(19):10034-10051. doi: 10.1093/nar/gky682.
2018
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| 5 | DNMT3B
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| Subtelomeric methylation distinguishes between subtypes of Immunodeficiency, Centromeric instability and Facial anomalies syndrome.
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| Toubiana S, Velasco G, Chityat A, Kaindl AM, Hershtig N, Tzur-Gilat A, Francastel C, Selig S.
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| Hum Mol Genet 27(20):3568-3581. doi: 10.1093/hmg/ddy265.
2018
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| 6 | DNMT3B, FSHD2, FSHMD1A, SMCHD1
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| Mutations in DNMT3B Modify Epigenetic Repression of the D4Z4 Repeat and the Penetrance of Facioscapulohumeral Dystrophy.
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| van den Boogaard ML, Lemmers RJ, Balog J, Wohlgemuth M, Auranen M, Mitsuhashi S, van der Vliet PJ, Straasheijm KR, van den Akker RF, Kriek M, Laurense-Bik ME, Raz V, van Ostaijen-Ten Dam MM, Hansson KB, van der Kooi EL, Kiuru-Enari S, Udd B, van Tol MJ, Nishino I, Tawil R, Tapscott SJ, van Engelen BG, van der Maarel SM.
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| Am J Hum Genet 98(5):1020-9. doi: 10.1016/j.ajhg.2016.03.013.
2016
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| 7 | DNMT3B, HELLS
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| The SNF2 family ATPase LSH promotes cell-autonomous de novo DNA methylation in somatic cells.
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| Termanis A, Torrea N, Culley J, Kerr A, Ramsahoye B, Stancheva I.
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| Nucleic Acids Res 44(16):7592-604. doi: 10.1093/nar/gkw424. Epub 2016 May 13.
2016
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| 8 | DNMT3A, DNMT3B
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| De novo DNA Methyltransferases Dnmt3a and Dnmt3b regulate the onset of Igκ light chain rearrangement during early B-cell development.
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| Manoharan A, Du Roure C, Rolink AG, Matthias P.
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| Eur J Immunol 45(8):2343-55. doi: 10.1002/eji.201445035.
2015
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| 9 | DNMT3A, DNMT3B
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| Targeted disruption of DNMT1, DNMT3A and DNMT3B in human embryonic stem cells.
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| Liao J, Karnik R, Gu H, Ziller MJ, Clement K, Tsankov AM, Akopian V, Gifford CA, Donaghey J, Galonska C, Pop R, Reyon D, Tsai SQ, Mallard W, Joung JK, Rinn JL, Gnirke A, Meissner A.
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| Nat Genet 47(5):469-78. doi: 10.1038/ng.3258.
2015
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| 10 | DNMT3A, DNMT3B
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| Ontogeny of CpG island methylation and specificity of DNMT3 methyltransferases during embryonic development in the mouse.
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| Auclair G, Guibert S, Bender A, Weber M.
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| Genome Biol 15(12):545.
2014
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| 11 | DNMT3A, DNMT3B
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| Dnmt3a and Dnmt3b have overlapping and distinct functions in hematopoietic stem cells.
|
| Challen GA, Sun D, Mayle A, Jeong M, Luo M, Rodriguez B, Mallaney C, Celik H, Yang L, Xia Z, Cullen S, Berg J, Zheng Y, Darlington GJ, Li W, Goodell MA.
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| Cell Stem Cell 15(3):350-64. doi: 10.1016/j.stem.2014.06.018.
2014
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| 12 | DNMT3B, ICF, ICF1, ZBTB24
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| Heterogeneous clinical presentation in ICF syndrome: correlation with underlying gene defects.
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| Weemaes CM, van Tol MJ, Wang J, van Ostaijen-Ten Dam MM, van Eggermond MC, Thijssen PE, Aytekin C, Brunetti-Pierri N, van der Burg M, Graham Davies E, Ferster A, Furthner D, Gimelli G, Gennery A, Kloeckener-Gruissem B, Meyn S, Powell C, Reisli I, Schuetz C, Schulz A, Shugar A, van den Elsen PJ, van der Maarel SM.
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| Eur J Hum Genet 21(11):1219-25. doi: 10.1038/ejhg.2013.40. Epub 2013 Mar 13.
2013
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| 13 | DNMT1, DNMT3A, DNMT3B
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| DNA 5-methylcytosine demethylation activities of the mammalian DNA methyltransferases.
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| Chen CC, Wang KY, Shen CK.
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| J Biol Chem 288(13):9084-91. doi: 10.1074/jbc.M112.445585.
2013
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| 14 | DNMT3A, DNMT3B, TCL1A
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| Tcl1 protein functions as an inhibitor of de novo DNA methylation in B-cell chronic lymphocytic leukemia (CLL).
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| Palamarchuk A, Yan PS, Zanesi N, Wang L, Rodrigues B, Murphy M, Balatti V, Bottoni A, Nazaryan N, Alder H, Rassenti L, Kipps TJ, Freitas M, Croce CM, Pekarsky Y.
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| Proc Natl Acad Sci U S A 109(7):2555-60. doi: 10.1073/pnas.1200003109. Epub 2012 Jan 30.
2012
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| 15 | DNMT3A, DNMT3B
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| The mammalian de novo DNA methyltransferases DNMT3A and DNMT3B are also DNA 5-hydroxymethylcytosine dehydroxymethylases.
|
| Chen CC, Wang KY, Shen CK.
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| J Biol Chem 287(40):33116-21.
2012
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| 16 | DNMT3B, ICF
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| DNA replication is altered in Immunodeficiency Centromeric instability Facial anomalies (ICF) cells carrying DNMT3B mutations.
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| Lana E, Mégarbané A, Tourrière H, Sarda P, Lefranc G, Claustres M, De Sario A.
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| Eur J Hum Genet 20(10):1044-50. doi: 10.1038/ejhg.2012.41. Epub 2012 Feb 29.
2012
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| 17 | DNMT3B
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| A DNMT3B Alternatively Spliced Exon and Encoded Peptide Are Novel Biomarkers of Human Pluripotent Stem Cells.
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| Gopalakrishna-Pillai S, Iverson LE.
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| PLoS One 6(6):e20663. Epub 2011 Jun 15.
2011
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| 18 | DNMT3A, DNMT3B
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| Nucleosomes containing methylated DNA stabilize DNA methyltransferases 3A/3B and ensure faithful epigenetic inheritance.
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| Sharma S, De Carvalho DD, Jeong S, Jones PA, Liang G.
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| PLoS Genet 7(2):e1001286.
2011
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| 19 | DNMT3B
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| DNMT3B gene amplification predicts resistance to DNA demethylating drugs.
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| Simó-Riudalbas L, Melo SA, Esteller M.
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| Genes Chromosomes Cancer 50(7):527-34. doi: 10.1002/gcc.20877. Epub 2011 Apr 11.
2011
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| 20 | DNMT3A, DNMT3B
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| Deletion of the de novo DNA methyltransferase Dnmt3a promotes lung tumor progression.
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| Gao Q, Steine EJ, Barrasa MI, Hockemeyer D, Pawlak M, Fu D, Reddy S, Bell GW, Jaenisch R.
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| Proc Natl Acad Sci U S A 108(44):18061-6. doi: 10.1073/pnas.1114946108. Epub 2011 Oct 19.
2011
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| 21 | DNMT3B, ICF
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| Epigenetic alteration of microRNAs in DNMT3B-mutated patients of ICF syndrome.
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| Gatto S, Della Ragione F, Cimmino A, Strazzullo M, Fabbri M, Mutarelli M, Ferraro L, Weisz A, D'Esposito M, Matarazzo MR.
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| Epigenetics 5(5):427-43. Epub 2010 Jul 1.
2010
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| 22 | DNMT3A, DNMT3B
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| DNA methyltransferase DNMT3b protein overexpression as a prognostic factor in patients with diffuse large B-cell lymphomas.
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| Amara K, Ziadi S, Hachana M, Soltani N, Korbi S, Trimeche M.
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| Cancer Sci 101(7):1722-30. Epub 2010 Mar 19.
2010
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| 23 | CENPC1, DNMT3B
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| DNMT3B interacts with constitutive centromere protein CENP-C to modulate DNA methylation and the histone code at centromeric regions.
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| Gopalakrishnan S, Sullivan BA, Trazzi S, Della Valle G, Robertson KD.
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| Hum Mol Genet 18(17):3178-93. Epub 2009 May 29.PMID: 19482874 2009
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| 24 | DNMT3B, HOXB3
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| Epigenetic silencing of the RASSF1A tumor suppressor gene through HOXB3-mediated induction of DNMT3B expression.
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| Palakurthy RK, Wajapeyee N, Santra MK, Gazin C, Lin L, Gobeil S, Green MR.
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| Mol Cell 36(2):219-30.
2009
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| 25 | DNMT3B
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| A novel DNMT3B splice variant expressed in tumor and pluripotent cells modulates genomic DNA methylation patterns and displays altered DNA binding.
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| Gopalakrishnan S, Van Emburgh BO, Shan J, Su Z, Fields CR, Vieweg J, Hamazaki T, Schwartz PH, Terada N, Robertson KD.
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| Mol Cancer Res 7(10):1622-34. Epub 2009 Oct 13.
2009
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| 26 | DNMT3A, DNMT3B
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| Selective anchoring of DNA methyltransferases 3A and 3B to nucleosomes containing methylated DNA.
|
| Jeong S, Liang G, Sharma S, Lin JC, Choi SH, Han H, Yoo CB, Egger G, Yang AS, Jones PA.
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| Mol Cell Biol 29(19):5366-76. Epub 2009 Jul 20.
2009
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| 27 | ICF, DNMT3B
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| Clinical spectrum of immunodeficiency, centromeric instability and facial dysmorphism (ICF syndrome).
|
| Hagleitner MM, Lankester A, Maraschio P, HultŽn M, Fryns JP, Schuetz C, Gimelli G, Davies EG, Gennery A, Belohradsky BH, de Groot R, Gerritsen EJ, Mattina T, Howard PJ, Fasth A, Reisli I, Furthner D, Slatter MA, Cant AJ, Cazzola G, van Dijken PJ, van Deuren M, de Greef JC, van der Maarel SM, Weemaes CM.
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| J Med Genet 45(2):93-9. Epub 2007 Sep 24. 2008
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| 28 | DNMT3B, ICF
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| DNA methyltransferase 3B (DNMT3B) mutations in ICF syndrome lead to altered epigenetic modifications and aberrant expression of genes regulating development, neurogenesis and immune function.
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| Jin B, Tao Q, Peng J, Soo HM, Wu W, Ying J, Fields CR, Delmas AL, Liu X, Qiu J, Robertson KD.
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| Hum Mol Genet 17(5):690-709. Epub 2007 Nov 20.
2008
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| 29 | CBX4, DNMT3B
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| DNA methyltransferase 3B acts as a co-repressor of the human polycomb protein hPc2 to repress fibroblast growth factor receptor 3 transcription.
|
| Kim SH, Park J, Choi MC, Park JH, Kim HP, Lee JH, Oh DY, Im SA, Bang YJ, Kim TY.
|
| Int J Biochem Cell Biol 40(11):2462-71. Epub 2008 May 18.
2008
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| 30 | DNMT3B, ICF
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| DNA methyltransferase 3B mutant in ICF syndrome interacts non-covalently with SUMO-1.
|
| Park J, Kim TY, Jung Y, Song SH, Kim SH, Oh DY, Im SA, Bang YJ.
|
| J Mol Med 86(11):1269-77. Epub 2008 Sep 2.
2008
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| 31 | ZHX1, DNMT3B
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| Zinc-fingers and homeoboxes 1 (ZHX1) binds DNA methyltransferase (DNMT) 3B to enhance DNMT3B-mediated transcriptional repression.
|
| Kim SH, Park J, Choi MC, Kim HP, Park JH, Jung Y, Lee JH, Oh DY, Im SA, Bang YJ, Kim TY.
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| Biochem Biophys Res Commun 355(2):318-23. Epub 2007 Feb 8. 2007
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| 32 | ICF, DNMT3B
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| ICF syndrome: high variability of the chromosomal phenotype and association with classical Hodgkin lymphoma.
|
| Schuetz C, Barbi G, Barth TF, Hoenig M, Schulz A, Moeller P, Smeets D, de Greef JC, van der Maarel SM, Vogel W, Debatin KM, Friedrich W.
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| Am J Med Genet A 143(17):2052-7. 2007
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| 33 | DNMT3B, ICF
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| Mutations in DNA methyltransferase DNMT3B in ICF syndrome affect its regulation by DNMT3L.
|
| Xie ZH, Huang YN, Chen ZX, Riggs AD, Ding JP, Gowher H, Jeltsch A, Sasaki H, Hata K, Xu GL.
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| Hum Mol Genet 15(9):1375-85. Epub 2006 Mar 16. 2006
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| 34 | DNMT3B
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| A novel DNMT3B subfamily, DeltaDNMT3B, is the predominant form of DNMT3B in non-small cell lung cancer.
|
| Wang L, Wang J, Sun S, Rodriguez M, Yue P, Jang SJ, Mao L.
|
| Int J Oncol 29(1):201-7. 2006
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| 35 | DNMT3B
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| DNMT3b polymorphism and hereditary nonpolyposis colorectal cancer age of onset.
|
| Jones JS, Amos CI, Pande M, Gu X, Chen J, Campos IM, Wei Q, Rodriguez-Bigas M, Lynch PM, Frazier ML.
|
| Cancer Epidemiol Biomarkers Prev 15(5):886-91. 2006
|
| 36 | DNMT3B, ICF
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| DNMT3B mutations and DNA methylation defect define two types of ICF syndrome.
|
| Jiang YL, Rigolet M, Bourc'his D, Nigon F, Bokesoy I, Fryns JP, Hulten M, Jonveaux P, Maraschio P, Megarbane A, Moncla A, Viegas-Pequignot E.
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| Hum Mutat 25(1):56-63. 2005
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| 37 | DNMT1, DNMT3B, XIST
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| XIST repression in the absence of DNMT1 and DNMT3B.
|
| Vasques LR, Stabellini R, Xue F, Tian XC, Soukoyan M, Pereira LV.
|
| DNA Res 12(5):373-8. Epub 2006 Jan 11.
2005
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| 38 | DNMT3B
|
| Role of the DNA methyltransferase variant DNMT3b3 in DNA methylation.
|
| Weisenberger DJ, Velicescu M, Cheng JC, Gonzales FA, Liang G, Jones PA.
|
| Mol Cancer Res 2(1):62-72. 2004
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| 39 | DNMT3B, HDAC1, HDAC2, SMARCA5, SUV39H1
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| DNMT3B interacts with hSNF2H chromatin remodeling enzyme, HDACs 1 and 2, and components of the histone methylation system.
|
| Geiman TM, Sankpal UT, Robertson AK, Zhao Y, Zhao Y, Robertson KD.
|
| Biochem Biophys Res Commun 318(2):544-55. 2004
|
| 40 | DNMT3B, KIF4A
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| Isolation and characterization of a novel DNA methyltransferase complex linking DNMT3B with components of the mitotic chromosome condensation machinery.
|
| Geiman TM, Sankpal UT, Robertson AK, Chen Y, Mazumdar M, Heale JT, Schmiesing JA, Kim W, Yokomori K, Zhao Y, Robertson KD.
|
| Nucleic Acids Res 32(9):2716-29. Print 2004. 2004
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| 41 | DNMT3A, DNMT3B
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| Chromatin targeting of de novo DNA methyltransferases by the PWWP domain.
|
| Ge YZ, Pu MT, Gowher H, Wu HP, Ding JP, Jeltsch A, Xu GL.
|
| J Biol Chem 279(24):25447-54. Epub 2004 Mar 3. 2004
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| 42 | DNMT1, DNMT3B, DNMT3A
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| Effects of chromatin structure on the enzymatic and DNA binding functions of DNA methyltransferases DNMT1 and Dnmt3a in vitro.
|
| Robertson AK, Geiman TM, Sankpal UT, Hager GL, Robertson KD.
|
| Biochem Biophys Res Commun 322(1):110-8. 2004
|
| 43 | ATRX, CREBBP, DNMT3B, MECP2, RPS6KA3
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| Syndromes of disordered chromatin remodeling.
|
| Ausio J, Levin DB, De Amorim GV, Bakker S, Macleod PM.
|
| Clin Genet 64(2):83-95. 2003
|
| 44 | ATRX, DNMT3B, EMD, FSHMD1A, HR,LBR, LMNA, MECP2, NSD1, SMARCAL1
|
| Perturbations of chromatin structure in human genetic disease: recent advances.
|
| Bickmore WA, Van Der Maarel SM.
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| Hum Mol Genet 12 Suppl 2:R207-13. Epub 2003 Aug 05. 2003
|
| 45 | POU5F1, FOXD3, DNMT3B, FZD7, SDC4, GABRB3, GPC4, TERF1
|
| Gene expression patterns in human embryonic stem cells and human pluripotent germ cell tumors.
|
| Sperger JM, Chen X, Draper JS, Antosiewicz JE, Chon CH, Jones SB, Brooks JD, Andrews PW, Brown PO, Thomson JA.
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| Proc Natl Acad Sci U S A 100(23):13350-5. Epub 2003 Oct 31. 2003
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| 46 | ATRX, DNMT1, DNMT3B, HDAC1, HDAC2, KAT2B, KAT8, MBD1, MBD2, MECP2, SIN3A
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| Analysis of mammalian proteins involved in chromatin modification reveals new metaphase centromeric proteins and distinct chromosomal distribution patterns.
|
| Craig JM, Earle E, Canham P, Wong LH, Anderson M, Choo KH.
|
| Hum Mol Genet 12(23):3109-21. Epub 2003 Sep 30. 2003
|
| 47 | DNMT3B, ICF
|
| The ICF syndrome, a DNA methyltransferase 3B deficiency and immunodeficiency disease.
|
| Ehrlich M.
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| Clin Immunol 109(1):17-28. Review.
2003
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| 48 | DNMT3B
|
| Overexpression of a splice variant of DNA methyltransferase 3b, DNMT3b4, associated with DNA hypomethylation on pericentromeric satellite regions during human hepatocarcinogenesis.
|
| Saito Y, Kanai Y, Sakamoto M, Saito H, Ishii H, Hirohashi S.
|
| Proc Natl Acad Sci U S A 99(15):10060-5. 2002
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| 49 | DNMT3A ,DNMT3B
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| The human DNA methyltransferases DNMT3A and DNMT3B have two types of promoters with different CpG contents.
|
| Yanagisawa Y, Ito E, Yuasa Y, Maruyama K.
|
| Biochim Biophys Acta 1577(3):457-65. 2002
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| 50 | ATRX, CREBBP, DNMT3B, MECP2
|
| Human diseases with underlying defects in chromatin structure and modification.
|
| Hendrich B, Bickmore W.
|
| Hum Mol Genet 10(20):2233-42. 2001
|
| 51 | DNMT3B, ICF
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| DNA methyltransferase 3B mutations linked to the ICF syndrome cause dysregulation of lymphogenesis genes.
|
| Ehrlich M, Buchanan KL, Tsien F, Jiang G, Sun B, Uicker W, Weemaes CM, Smeets D, Sperling K, Belohradsky BH, Tommerup N, Misek DE, Rouillard JM, Kuick R, Hanash SM.
|
| Hum Mol Genet 10(25):2917-31. 2001
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| 52 | DNMT1, DNMT3B
|
| Expression of DNA methyltransferases DNMT1, 3A, and 3B in normal hematopoiesis and in acute and chronic myelogenous leukemia.
|
| Mizuno S, Chijiwa T, Okamura T, Akashi K, Fukumaki Y, Niho Y, Sasaki H.
|
| Blood 97(5):1172-9. 2001
|
| 53 | DNMT3B, G6PD, ICF, VAMP7
|
| Escape from gene silencing in ICF syndrome: evidence for advanced replication time as a major determinant.
|
| Hansen RS, Stoger R, Wijmenga C, Stanek AM, Canfield TK, Luo P, Matarazzo MR, D'Esposito M, Feil R, Gimelli G, Weemaes CM, Laird CD, Gartler SM.
|
| Hum Mol Genet 9(18):2575-87. 2000
|
| 54 | ICF, DNMT3B
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| Genetic variation in ICF syndrome: evidence for genetic heterogeneity.
|
| Wijmenga C, Hansen RS, Gimelli G, Bjorck EJ, Davies EG, Valentine D, Belohradsky BH, van Dongen JJ, Smeets DF, van den Heuvel LP, Luyten JA, Strengman E, Weemaes C, Pearson PL.
|
| Hum Mutat 16(6):509-17. Review. 2000
|
| 55 | DNMT3A, DNMT3B
|
| Cloning, expression and chromosome locations of the human DNMT3 gene family.
|
| Xie S, et al.
|
| Gene 236(1):87-95 1999
|
| 56 | DNMT1, DNMT3A, DNMT3B
|
| The human DNA methyltransferases (DNMTs) 1, 3a and 3b: coordinate mRNA expression in normal tissues and overexpression in tumors.
|
| Robertson KD, et al.
|
| Nucleic Acids Res 27(11):2291-8 1999
|
| 57 | DNMT3A, DNMT3B
|
| DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development.
|
| Okano M, et al.
|
| Cell 99(3):247-57 1999
|
| 58 | DNMT3B, ICF
|
| The DNMT3B DNA methyltransferase gene is mutated in the ICF immunodeficiency syndrome.
|
| Hansen RS, Wijmenga C, Luo P, Stanek AM, Canfield TK, Weemaes CM, Gartler SM.
|
| Proc Natl Acad Sci U S A 96(25):14412-7 1999
|
| 59 | DNMT3B, ICF
|
| Chromosome instability and immunodeficiency syndrome caused by mutations in a DNA methyltransferase gene.
|
| Xu GL, Bestor TH, Bourc'his D, Hsieh CL, Tommerup N, Bugge M, Hulten M, Qu X, Russo JJ, Viegas-Pequignot E.
|
| Nature 402(6758):187-91 1999
|
| 60 | DOPEY2, DNMT3B, AGPAT3
|
| Genomic sequencing and identification of 33 genes on human chromosome 21.
|
| Kudoh J, Shibuya K, Kawasaki K, Shintani A, Nagamine K, Wang J, Asakawa JJS, Minoshima S, Shimizu N.
|
| Cytogenet Cell Genet 86:17 1999
|
| 61 | DNMT1, DNMT3A, DNMT3B
|
| Cloning and characterization of a family of novel mammalian DNA (cytosine-5) methyltransferases.
|
| Okano, M.; Xie, S.; Li, E.
|
| Nat Genet 19(3):219-20. No abstract available 1998
|
| 62 | DNMT1, TRDMT1, DNMT3A, DNMT3B
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| Predictive motifs derived from cytosine methyltransferases.
|
| Posfai J, et al.
|
| Nucleic Acids Res 17(7):2421-35 1989
|