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FLASH GENE
Symbol ZNF83 contributors: npt - updated : 04-08-2010
HGNC name zinc finger protein 83
HGNC id 13158
Location 19q13.41      Physical location : 53.115.619 - 53.193.886
Synonym name
  • zinc finger protein 83 (HPF1)
  • zinc finger protein HPF1
  • zinc finger protein 816B
  • Synonym symbol(s) FLJ11015, FLJ14876, HPF1, ZNF816B, MGC33853, FLJ30097, FLJ90585
    DNA
    TYPE functioning gene
    STRUCTURE 26.03 kb     3 Exon(s)
    10 Kb 5' upstream gene genomic sequence study
    MAPPING cloned Y linked N status provisional
    Physical map
    MGC45556 19q13.41 hypothetical protein MGC45556 LOC90317 19q13.41 hypothetical protein LOC90317 LOC147655 19q13.41 similar to ribosomal protein L37 LOC162962 19q13.41 similar to Zinc finger protein Kr18 (HKr18) PPP2R1A 19q13.41 protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform LOC90321 19q13.41 hypothetical protein LOC90321 MGC32104 19q13.41 hypothetical protein MGC32104 FLJ36040 19q13.41 hypothetical protein FLJ36040 LOC90322 19q13.41 similar to hypothetical protein MGC32104 KIAA1827 LOC390959 19 similar to developmental pluripotency associated 5; embryonal stem cell specific gene 1 FLJ25344 FLJ31384 19q13.41 hypothetical protein FLJ31384 LOC388558 19 hypothetical gene supported by BX640933; NM_198457 FLJ10891 19q13.42 hypothetical protein FLJ10891 ZNF137 19q13.3-q13.4 zinc finger protein 137 (clone pHZ-30) ZNF83 19q13.3-q13.4 zinc finger protein 83 (HPF1) MGC5384 19q13.42 hypothetical protein MGC5384 KR-ZNF1 19q13.42 zinc finger protein KR-ZNF1 ZNF28 19q13.4 zinc finger protein 28 (KOX 24) LOC390960 19 similar to Zinc finger protein 83 (Zinc finger protein HPF1) LOC90333 19q13.42 hypothetical protein LOC90333 LOC390961 19 similar to Zinc finger protein 137 LOC390962 19 similar to Zinc finger protein 137 LOC162967 19q13.42 hypothetical protein LOC162967 LOC388559 19 similar to zinc finger protein KR-ZNF1 LOC125893 19q13.42 hypothetical protein LOC125893 FLJ12985 19q13.42 hypothetical protein FLJ12985 LOC204800 19q13.42 actin related protein 2/3 complex subunit 1A pseudogene LOC388560 19 similar to RIKEN cDNA 1300007C21 FLJ32214 19q13.42 hypothetical protein FLJ32214 ZNF160 19q13.3-q13.4 zinc finger protein 160
    RNA
    TRANSCRIPTS type messenger
    identificationnb exonstypebpproduct
    ProteinkDaAAspecific expressionYearPubmed
    3 - 2622 - 516 - -
    isoform a
    4 - 2538 - 488 - -
    isoform b
    7 - 2901 - 488 - -
    isoform b
    4 - 2749 - 516 - -
    isoform a
    5 - 2873 - 516 - -
    isoform a
    5 - 2847 - 516 - -
    isoform a
    6 - 2963 - 516 - -
    isoform a
    EXPRESSION
    Type ubiquitous
    constitutive of
       expressed in (based on citations)
    organ(s)
    SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
    Digestivemouthtongue  highly
    Lymphoid/Immunespleen   highly
     thymus   highly
    Reproductivefemale systemuterus  highly
    tissue
    SystemTissueTissue level 1Tissue level 2LevelPubmedSpeciesStageRna symbol
    Lymphoid    
    cells
    SystemCellPubmedSpeciesStageRna symbol
    Lymphoid/ImmuneT cell
    cell lineage
    cell lines
    fluid/secretion
    at STAGE
    physiological period pregnancy
    Text placenta
    PROTEIN
    PHYSICAL PROPERTIES
    STRUCTURE
    motifs/domains
  • 15 zinc finger motifs, C2H2 type
  • conjugated MetalloP
    HOMOLOGY
    Homologene
    FAMILY
  • krueppel C2H2-type zinc-finger protein family
  • CATEGORY regulatory , transcription factor
    SUBCELLULAR LOCALIZATION     intracellular
    intracellular,nucleus,chromatin/chromosome
    basic FUNCTION
  • may be involved in transcriptional regulation
  • CELLULAR PROCESS nucleotide, transcription, regulation
    PHYSIOLOGICAL PROCESS development
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA binding
    RNA
    small molecule metal binding,
    Zn2+
    protein
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS