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FLASH GENE
Symbol ZNF80 contributors: - updated : 19-05-2006
HGNC name zinc finger protein 80 (pT17)
HGNC id 13155
Location 3q13.3      Physical location : 113.953.480 - 113.956.425
Synonym symbol(s) pT17
DNA
TYPE functioning gene
SPECIAL FEATURE overlapping
text LTR of an endogenous retroviral element
STRUCTURE 2.00 kb     2 Exon(s)
10 Kb 5' upstream gene genomic sequence study
motif Viral sequence   long terminal repeat
text structure driven by solitary LTR of ERV9 family, the LTR acts as a promoter
MAPPING cloned Y linked   status confirmed
Map 5' - ERV9 - ZNF80 - 3'
Authors Di Cristofano (95)
Physical map
MOX2 3q12-q13 antigen identified by monoclonal antibody MRC OX-2 BTLA 3q13.2 B and T lymphocyte associated APG3 3q13.2 B and T lymphocyte associated SLC35A5 3q13.2 solute carrier family 35, member A5 URB 3q13.2 steroid sensitive gene 1 LOC344807 3q13.2 similar to Cell surface glycoprotein OX2 receptor precursor (CD200 cell surface glycoprotein receptor) CD200R 3q13.2 cell surface glycoprotein receptor CD200 HSPC135 3q13.2 HSPC135 protein DKFZP434F2021 3q13.2 DKFZP434F2021 protein BOC 3q13.2 brother of CDO FLJ11142 3q13.2 hypothetical protein FLJ11142 LOC152185 3q13.2-q13.31 hypothetical protein AY099107 FLJ20174 3q13.31 hypothetical protein FLJ20174 KIAA2018 3q13.31 similar to K06A9.1b.p MAK3P 3q13.31 likely ortholog of mouse Mak3p homolog (S. cerevisiae) ATP6V1A 3q13.31 ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A DKFZp434C0328 3q13.31 hypothetical protein DKFZp434C0328 MGC42530 3q13.31 hypothetical protein MGC42530 KIAA1407 3q13.31 KIAA1407 protein QTRTD1 3q13.31 queuine tRNA-ribosyltransferase domain containing 1 LOC391566 3 similar to Histone H2B.n (H2B/n) (H2B.2) DRD3 3q13.3 dopamine receptor D3 LOC391567 3 similar to hypothetical protein FLJ11560 ZNF80 3q13.3 zinc finger protein 80 (pT17) FLJ39873 3q13.31 hypothetical protein FLJ39873 ZNF288 3q13.2 zinc finger protein 288 LOC344811 3q13.31 similar to DNA-binding protein B LOC391568 3 similar to EIF4EL3 protein GAP43 3q13.1-q13.2 growth associated protein 43 LSAMP 3q13.2-q21 limbic system-associated membrane protein
regionally located in a region involved in chromosome rearrangements associated with myeloid disorders
RNA
TRANSCRIPTS type messenger
EXPRESSION
Type
constitutive of
   expressed in (based on citations)
organ(s)
SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
Respiratorylung    
cell lineage myeloid,hematopoietic cell lineage
cell lines
fluid/secretion
at STAGE
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
zinc finger motif of C2H2 Kruppel type
conjugated MetalloP
HOMOLOGY
Homologene
FAMILY Kruppel family of C2H2-type zinc finger proteins
CATEGORY regulatory , transcription factor
SUBCELLULAR LOCALIZATION     intracellular
intracellular,nucleus,chromatin/chromosome
basic FUNCTION involved in transcriptional regulation
CELLULAR PROCESS nucleotide, transcription, regulation
PHYSIOLOGICAL PROCESS
PATHWAY
metabolism
signaling
a component
INTERACTION
DNA binding
RNA
small molecule metal binding,
Zn2+
protein
cell & other
REGULATION
ASSOCIATED DISORDERS
ANIMAL & CELL MODELS