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FLASH GENE
Symbol TMC5 contributors: npt - updated : 19-01-2010
HGNC name transmembrane channel-like 5
HGNC id 22999
Location 16p12.3      Physical location : 19.422.056 - 19.510.432
Synonym symbol(s) FLJ13593
DNA
TYPE functioning gene
STRUCTURE 88.38 kb     22 Exon(s)
10 Kb 5' upstream gene genomic sequence study
MAPPING cloned Y linked N status provisional
Physical map
LOC146110 16p13.12 similar to 60S ribosomal protein L7 LOC390678 16 similar to Group X secretory phospholipase A2 precursor (Phosphatidylcholine 2-acylhydrolase GX) (GX sPLA2) (sPLA2-X) LOC339047 16p13.12 hypothetical protein LOC339047 PKD1P4 16p13.3 hypothetical protein LOC339047 PKD1P5 16p13.3 hypothetical protein LOC339047 LOC283820 16p13.12 hypothetical protein LOC283820 PM5 16p13.12 hypothetical protein LOC283820 LOC388217 16 hypothetical gene supported by AF168791; NM_001171 RPS15A 16p ribosomal protein S15a ARL6IP 16p12-p11.2 ADP-ribosylation factor-like 6 interacting protein SMG1 16p13.11 PI-3-kinase-related kinase SMG-1 TMC7 16p13.11 transmembrane channel-like 7 COQ7 16p13.11-p12.3 coenzyme Q7 homolog, ubiquinone (yeast) LOC162073 16p13.11 hypothetical protein LOC162073 LOC51760 16p13.11 B/K protein LOC388218 16 similar to QRWT5810 LOC388219 16 LOC388219 TMC5 16p13.11 transmembrane channel-like 5 MIR16 16p12-p11.2 membrane interacting protein of RGS16 CP110 16p13.11 CP110 protein MGC16824 16p13.11 esophageal cancer associated protein MGC35048 16p13.11 hypothetical protein MGC35048 GPRC5B 16p12 G protein-coupled receptor, family C, group 5, member B LOC124274 16p13.11 similar to putative G-protein coupled receptor LOC390679 16 similar to sal-like 4 GP2 9q21.11-q21.2 glycoprotein 2 (zymogen granule membrane) UMOD 16p13.11 uromodulin (uromucoid, Tamm-Horsfall glycoprotein) LOC204474 16p13.11 hypothetical protein LOC204474 FLJ20581 16p13.11 hypothetical protein FLJ20581 LOC123876 16p13.11 hypothetical protein LOC123876 LOC348158 16p13.11 xenobiotic/medium-chain fatty acid:CoA ligase BUCS1 16p13;.1 butyryl Coenzyme A synthetase 1 LOC390680 16 similar to Hypothetical protein MGC56918 FLJ20274 16p13.11 hypothetical protein FLJ20274 SAH 16p13.11 SA hypertension-associated homolog (rat) MGC16943 16p13.11 similar to RIKEN cDNA 4933424N09 gene LOC81691 16p13.11 exonuclease NEF-sp MGC48972 16p13.11 hypothetical protein MGC48972 LOC57149 16p11.2 hypothetical protein A-211C6.1 FLJ23558 16p13.11-p12.3 hypothetical protein FLJ23558 DNAH3 16p12 dynein, axonemal, heavy polypeptide 3
RNA
TRANSCRIPTS type messenger
identificationnb exonstypebpproduct
ProteinkDaAAspecific expressionYearPubmed
22 - 4917 - 1006 - -
21 - 4743 - 948 - -
18 - 3687 - 760 - -
EXPRESSION
Type
constitutive of
   expressed in (based on citations)
organ(s)
cells
SystemCellPubmedSpeciesStageRna symbol
Respiratoryepithelial cell
cell lineage
cell lines
fluid/secretion blood
at STAGE
physiological period pregnancy
Text placenta
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
  • seven TM domains
  • HOMOLOGY
    Homologene
    FAMILY
  • TMC family
  • CATEGORY transport channel
    SUBCELLULAR LOCALIZATION     intracellular
    intracellular,cytoplasm,organelle,membrane
    intracellular,cytoplasm,organelle,endoplasmic reticulum ,rough,smooth
    basic FUNCTION unknown
    CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS