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FLASH GENE
Symbol SYT13 contributors: - updated : 28-09-2004
HGNC name synaptotagmin XIII
HGNC id 14962
Location 11p12-p11      Physical location : 45.261.852 - 45.307.884
Synonym symbol(s) KIAA1427
DNA
TYPE functioning gene
STRUCTURE 46.00 kb     6 Exon(s)
10 Kb 5' upstream gene genomic sequence study
MAPPING cloned Y linked N status provisional
Physical map
LOC120449 11p11.2 similar to CTBP2 protein LOC143970 11p11.2 hypothetical LOC143970 LOC387762 11 LOC387762 HSD17B12 11p11.2 hydroxysteroid (17-beta) dehydrogenase 12 DEPC-1 11p11.2 prostate cancer antigen-1 LOC387763 11 hypothetical gene supported by BC052560 LOC390110 11 similar to 1-aminocyclopropane-1-carboxylate synthase PHACS 11p11 1-aminocyclopropane-1-carboxylate synthase EXT2 11p12-p11.2 exostoses (multiple) 2 ALX4 11p11.2 aristaless-like homeobox 4 LOC390111 11 similar to 60S ribosomal protein L7a (Surfeit locus protein 3) (PLA-X polypeptide) KAI1 11p11.2-p11.13 kangai 1 (suppression of tumorigenicity 6, prostate; CD82 antigen (R2 leukocyte antigen, antigen detected by monoclonal and antibody IA4)) LOC387764 11 LOC387764 LOC90139 11p11.2 tetraspanin similiar to uroplakin 1 TP53I11 11pter-p15.5 tumor protein p53 inducible protein 11 PRDM11 11p11 PR domain containing 11 LOC219638 11p11.2 similar to KIAA0543 protein SYT13 11p12-p11 synaptotagmin XIII CHST1 11p11.2-p11.1 carbohydrate (keratan sulfate GAL-6) sulfotransferase 1 DKFZp779M0652 11p11.2 hypothetical protein DKFZp779M0652 SLC35C1 11p11.2 solute carrier family 35, member C1 CRY2 11p12-q21.1 cryptochrome 2 (photolyase-like) MAPK8IP1 11p12-p11.2 mitogen-activated protein kinase 8 interacting protein 1 LOC143678 11p11.2 similar to RIKEN cDNA 1700021K07 PEX16 11p11.11 peroxisomal biogenesis factor 16 GYLTL1B 11p11.2 glycosyltransferase-like 1B BHC80 11p11.2 glycosyltransferase-like 1B CREB3L1 11p11.2 cAMP responsive element binding protein 3-like 1 DGKZ 11p11.2 diacylglycerol kinase, zeta 104kDa MDK 11p11.2 midkine (neurite growth-promoting factor 2) CHRM4 11p12-p11.2 cholinergic receptor, muscarinic 4 LOC387765 11 LOC387765 FLJ20294 11p11.2 hypothetical protein FLJ20294 FLJ32675 11p11.2 hypothetical protein FLJ32675 KIAA0652 11p12-q11 hypothetical protein FLJ32675 ARHGAP1 11p12-q12 Rho GTPase activating protein 1 ZNF408 11p11.2 zinc finger protein 408 F2 11p11-q12 coagulation factor II (thrombin) ch-TOG 11p11.2 KIAA0097 gene product LRP4 11p12-p11.2 low density lipoprotein receptor-related protein 4 MGC4707 11p11.2 hypothetical protein MGC4707
RNA
TRANSCRIPTS type messenger
EXPRESSION
Type
constitutive of
   expressed in (based on citations)
organ(s)
SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
Nervousbrain   highly
cell lineage
cell lines
fluid/secretion
at STAGE
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
an intravesicular N terminal domain,a single transmembrane (TM) region,two protein kinase C-homologous repeats (Ca2+ binding domains C2) and a conserved WHXL motif in the C terminus
mono polymer homomer , heteromer , complex
HOMOLOGY
interspecies ortholog to murine Syt13
ortholog to rattus Syt13
Homologene
FAMILY synaptotagmin family
CATEGORY structural protein , transport
SUBCELLULAR LOCALIZATION     plasma membrane
    intracellular
intracellular,cytoplasm,cytosolic,vesicle
basic FUNCTION
  • involved in constitutive vesicle transport
  • CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS exocytosis transport , endocytosis transport
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS