Selected-GenAtlas references | SOURCE | GeneCards | NCBI Gene | Swiss-Prot | Ensembl |
HGNC | UniGene | Nucleotide | OMIM | UCSC |
Home Page |
FLASH GENE |
Symbol | SS18L2 | contributors: KTN/npt - updated : 22/10/2008 |
HGNC name | synovial sarcoma translocation gene on chromosome 18-like 2 |
HGNC id | 15593 |
|
Location | 3p21 Physical location : 42.632.297 - 42.636.490 |
Synonym name | SYT homolog 2 |
Synonym symbol(s) | KIAA-ISO |
DNA |
TYPE | functioning gene |
STRUCTURE | 4.19 kb 3 Exon(s) |
10 Kb 5' upstream gene genomic sequence study |
---|
regulatory sequence | Promoter (CAAT box) |
cytosine-phosphate-guanine/HTF | |
text structure | a CAAT box and CpG islands suggesting that it is a housekeeping gene |
MAPPING | cloned | Y | linked | N | status | confirmed |
RNA |
TRANSCRIPTS | type | messenger |
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|
EXPRESSION |
Type |
expressed in | (based on citations) | ||||||||||||||||||||||||||||||||||||||||||||||||||
organ(s) |
|
tissue |
|
cell lineage
cell lines
| fluid/secretion
| moderately in blood | |
at STAGE |
physiological period | fetal |
Text | highly in umbilical cord |
PROTEIN |
PHYSICAL PROPERTIES
STRUCTURE
| |
motifs/domains
|
HOMOLOGY |
interspecies | homolog to dog SS18L2 (94.8 pc) |
homolog to murine Deb1 (87 pc) | |
homolog to chicken SS18L2 (80.5 pc) |
intraspecies | homolog to SS18 |
Homologene |
FAMILY |
CATEGORY | unknown/unspecified |
SUBCELLULAR LOCALIZATION |
basic FUNCTION | unknown |
CELLULAR PROCESS |
PHYSIOLOGICAL PROCESS |
PATHWAY |
metabolism |
signaling |
a component |
INTERACTION |
DNA |
RNA |
small molecule |
protein |
cell & other |
REGULATION |
ASSOCIATED DISORDERS |
ANIMAL & CELL MODELS |