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FLASH GENE
Symbol SPATA9 contributors: - updated : 23-10-2006
HGNC name spermatogenesis associated 9
HGNC id 22988
Location 5q15      Physical location : 94.994.019 - 95.018.714
Synonym symbol(s) NYD-SP16, FLJ35906
DNA
TYPE functioning gene
STRUCTURE 30.00 kb     9 Exon(s)
10 Kb 5' upstream gene genomic sequence study
text structure an atypical polyadenylation signal (AGTAAA) in 3'UTR
MAPPING cloned Y linked N status confirmed
RNA
TRANSCRIPTS type messenger
identificationnb exonstypebpproduct
ProteinkDaAAspecific expressionYearPubmed
- - 1194 28 254 - Cheng
lacks several 3' exons and has an alternate 3' end
EXPRESSION
Type
constitutive of
   expressed in (based on citations)
organ(s)
SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
Cardiovascularheart   lowly
Endocrinepancreas   highly
Nervousbrain   lowly
Reproductivefemale systemplacenta  lowly
 male systemtestis  highly
Respiratorylung   lowly
cell lineage
cell lines
fluid/secretion
at STAGE
physiological period pregnancy
Text placenta
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
a transmembrane domain
HOMOLOGY
Homologene
FAMILY
CATEGORY unknown/unspecified
SUBCELLULAR LOCALIZATION     plasma membrane
basic FUNCTION
  • may be involved in testicular development/spermatogenesis and be an important factor in male infertility
  • CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS development , reproduction/sex
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS