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FLASH GENE
Symbol SMYD5 contributors: mct/npt - updated : 26-02-2009
HGNC name SMYD family member 5
HGNC id 16258
Location 2p13.2      Physical location : 73.441.365 - 73.454.355
Synonym name
  • SET and MYND domain-containing protein 5
  • G retinoic acid response gene
  • retinoic acid induced 15
  • protein NN8-4AG
  • Synonym symbol(s) NN8-4AG, RRG1, RAI15, ZMYND23
    DNA
    TYPE functioning gene
    STRUCTURE 12.99 kb     13 Exon(s)
    10 Kb 5' upstream gene genomic sequence study
    regulatory sequence cytosine-phosphate-guanine/HTF
    Binding site   transcription factor
    motif
    text structure
  • retinoic X receptors elements (RXRE), binding RAR-RXR heterodimers or RXR homodimers
  • SP1 binding site
  • MAPPING cloned Y linked N status provisional
    regionally located in the PARK3 region
    RNA
    TRANSCRIPTS type messenger
    identificationnb exonstypebpproduct
    ProteinkDaAAspecific expressionYearPubmed
    13 - 2585 47.21 418 - Shago (1996)
    EXPRESSION
    Type
       expressed in (based on citations)
    organ(s)
    SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
    Nervousbrain    
    Reproductivefemale systemovary   
    cell lineage
    cell lines
    fluid/secretion
    at STAGE
    PROTEIN
    PHYSICAL PROPERTIES
    STRUCTURE
    motifs/domains
  • a SET domain
  • MYND-type zinc finger
  • HOMOLOGY
    interspecies homolog to murine Smyd5
    homolog to rattus LOC312503
    Homologene
    FAMILY
  • SMYD family
  • CATEGORY unknown/unspecified
    SUBCELLULAR LOCALIZATION     intracellular
    intracellular,cytoplasm
    basic FUNCTION unknown
    CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism organic acid
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein
    cell & other
    REGULATION
    induced by retinoic acid
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS