Selected-GenAtlas references SOURCE GeneCards NCBI Gene Swiss-Prot Ensembl
HGNC UniGene Nucleotide OMIM UCSC
Home Page
FLASH GENE
Symbol SCARA3 contributors: mct/npt - updated : 31-07-2004
HGNC name scavenger receptor class A, member 3
HGNC id 19000
Location 8p21.1      Physical location : 27.491.576 - 27.534.286
Synonym name
  • cellular stress response protein 1
  • anaphase promoting complex subunit 7
  • macrophage scavenger receptor-like 1
  • Synonym symbol(s) CSR, CSR1, MSLR1, APC7
    DNA
    TYPE functioning gene
    STRUCTURE 38.96 kb     6 Exon(s)
    10 Kb 5' upstream gene genomic sequence study
    MAPPING cloned Y linked N status provisional
    RNA
    TRANSCRIPTS type messenger
    identificationnb exonstypebpproduct
    ProteinkDaAAspecific expressionYearPubmed
    6 - 1711 52.3 466 - Zhu (2009)
    6 - 3631 65 606 - Zhu (2009)
    EXPRESSION
    Type widely
       expressed in (based on citations)
    organ(s)
    SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
    Visualeye   highly
    tissue
    SystemTissueTissue level 1Tissue level 2LevelPubmedSpeciesStageRna symbol
    Connectivebone  highly
    cell lineage
    cell lines
    fluid/secretion
    at STAGE
    PROTEIN
    PHYSICAL PROPERTIES
    STRUCTURE
    motifs/domains
  • a membrane-spanning
  • an alpha-helix coiled-coil domain
  • a collagen-like domain
  • C terminus binds with cleavage and polyadenylation-specific factor 3 (CPSF3), an enzyme necessary for polyadenylation of RNA (Zhu 2009)
  • HOMOLOGY
    Homologene
    FAMILY
    CATEGORY tumor suppressor
    SUBCELLULAR LOCALIZATION     intracellular
    intracellular,cytoplasm,organelle,membrane
    intracellular,cytoplasm,organelle,endoplasmic reticulum
    intracellular,cytoplasm,organelle,Golgi
    text primarily in the cytoplasm near the cell membrane (Zhu 2009)
    basic FUNCTION
  • may be a potent tumor sup-pressor gene (Yu 2006)
  • undergoes hypermethylation in over 30 p100 of prostate cancers (Zhu (2009)
  • probably has a role beyond a cell stress-response gene (Zhu 2009)
  • induce cell death through a novel mechanism by hijacking a critical RNA processing enzyme (Zhu 2009)
  • CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein
  • binding to CPSF3 (induced redistribution of CPSF3 from the nucleus to the cytoplasm)(Zhu 2009)
  • cell & other
    REGULATION
    ASSOCIATED DISORDERS
    corresponding disease(s)
    Other morbid association(s)
    TypeGene ModificationChromosome rearrangementProtein expressionProtein Function
    tumoral     --low  
    in prostate cancer with associated with a high rate of prostate cancer metastasis(Yu 2006)
    Susceptibility
    Variant & Polymorphism
    Candidate gene
    Marker
    Therapy target
    ANIMAL & CELL MODELS