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FLASH GENE
Symbol SCAND1 contributors: - updated : 20-05-2005
HGNC name SCAN domain containing 1
HGNC id 10566
Location 20q11.1-q11.23      Physical location : 34.541.545 - 34.542.428
Synonym name
  • SCAN-related protein RAZ1
  • SCAN domain containing protein 1
  • Synonym symbol(s) RAZ1, SDP1
    DNA
    TYPE functioning gene
    STRUCTURE 0.00 kb     2 Exon(s)
    10 Kb 5' upstream gene genomic sequence study
    MAPPING cloned Y linked N status provisional
    RNA
    TRANSCRIPTS type messenger
    text two transcript variants with different 5' UTRs, but encoding the same protein
    identificationnb exonstypebpproduct
    ProteinkDaAAspecific expressionYearPubmed
    - - 916 - 179 - Sander
    - - 840 19.1 179 - Sander
    EXPRESSION
    Type widely
    constitutive of
       expressed in (based on citations)
    organ(s)
    SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
    Lymphoid/Immunelymph node    
    Reproductivefemale systemovary   
    Skin/Tegumentskin    
    Urinarykidney    
    tissue
    SystemTissueTissue level 1Tissue level 2LevelPubmedSpeciesStageRna symbol
    Connectivebone   
    cell lineage
    cell lines
    fluid/secretion
    at STAGE
    PROTEIN
    PHYSICAL PROPERTIES
    STRUCTURE
    motifs/domains
  • a SCAN box (leucine-rich domain), potentially involved in protein-protein interactions, an arginine-rich domain
  • mono polymer homomer , heteromer , dimer
    HOMOLOGY
    interspecies homolog to murine Scand1
    Homologene
    FAMILY
    CATEGORY regulatory , transcription factor
    SUBCELLULAR LOCALIZATION     plasma membrane,junction
        intracellular
    intracellular,nucleus
    basic FUNCTION
  • potential regulator of transcriptional activity
  • CELLULAR PROCESS nucleotide, transcription, regulation
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA binding
    small molecule
    protein ZNF24, MZF1B (alternative isoform of ZNF42)
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS