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FLASH GENE
Symbol RAB40A contributors: - updated : 29-02-2004
HGNC name RAB40A, member RAS oncogene family
HGNC id 18283
Location Xq22.1      Physical location : 102.754.681 - 102.774.417
Synonym name SOCS box containing protein RAR2A
Synonym symbol(s) RAR2A
DNA
TYPE functioning gene
STRUCTURE 19.00 kb     3 Exon(s)
10 Kb 5' upstream gene genomic sequence study
MAPPING cloned Y linked N status provisional
Physical map
NXF2 Xq22-q23 nuclear RNA export factor 2 TMSNB Xq21.33-q22.3 thymosin, beta, identified in neuroblastoma cells LOC139707 Xq22.1 similar to checkpoint suppressor 1 NXF4 Xq22 nuclear RNA export factor 4 FLJ12969 Xq22.1-q22.3 hypothetical protein FLJ12969 GASP Xq22.1 G protein-coupled receptor-associated sorting protein LOC114928 Xq22.1 hypothetical protein BC013576 KIAA1701 Xq23 KIAA1701 protein MTND2P2 Xq22.2 NADH dehydrogenase 2 pseudogene 2 LOC286526 Xq22.2 Ras-like GTPase-like BEX1 Xq21-q23 brain expressed, X-linked 1 NXF3 Xq22-q23 nuclear RNA export factor 3 FLJ10097 Xq22.1-q22.3 hypothetical protein FLJ10097 MGC45400 Xq22.2 hypothetical protein MGC45400 LOC340543 Xq22.2 similar to hypothetical protein MGC15737 DJ79P11.1 Xq22 X-linked protein MGC23947 Xq22.1 hypothetical protein MGC23947 LOC51186 Xq22.2 pp21 homolog NGFRAP1 Xq22.1 nerve growth factor receptor (TNFRSF16) associated protein 1 RAB40A Xq22.1 RAB40A, member RAS oncogene family FLJ21174 Xq22.2 hypothetical protein FLJ21174 MGC15737 Xq22.2 hypothetical protein MGC15737 TCEAL1 Xq22.1 transcription elongation factor A (SII)-like 1 LOC139779 Xq22.2 similar to hypothetical protein FLJ38101 MORF4L2 Xq22 mortality factor 4 like 2 MGC39655 Xq22.2 hypothetical protein MGC39655 PLP1 Xq22.2 proteolipid protein 1 (Pelizaeus-Merzbacher disease, spastic paraplegia 2, uncomplicated) RAB9B Xq22.1-q22.3 RAB9B, member RAS oncogene family LOC347393 Xq22.2 similar to bA370B6.1 (similar to histone H2B) LOC170242 Xq22.2 similar to mitochondrial carrier triple repeat 1 MGC39900 Xq22.2 hypothetical protein MGC39900 LOC158983 Xq22.2 hypothetical protein LOC158983 LOC286436 Xq22.2 hypothetical protein LOC286436 LOC392512 X similar to histone H2B-related protein LOC392513 X similar to mitochondrial carrier triple repeat 1 LOC392514 X similar to cU46H11.1 (novel protein) LOC139231 Xq22.2 hypothetical protein BC016683 ESX1L Xq22.1-q22.3 extraembryonic, spermatogenesis, homeobox 1-like LOC392515 X similar to prohibitin
RNA
TRANSCRIPTS type messenger
EXPRESSION
Type
constitutive of
   expressed in (based on citations)
organ(s)
SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
Nervousbrain    
Reproductivemale systemprostate   
Respiratorylung    
Urinarykidney    
cell lineage
cell lines
fluid/secretion
at STAGE
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
  • Rab F motifs and Rab SF regions
  • a C terminal SOCS box
  • conjugated LipoP
    HOMOLOGY
    Homologene
    FAMILY RAS oncogene family
    CATEGORY regulatory , protooncogene , transport
    SUBCELLULAR LOCALIZATION     intracellular
    intracellular,cytoplasm,cytosolic,vesicle
    text membrane-associated
    basic FUNCTION
  • regulating vesicular trafficking pathways
  • CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS
    text vesicular trafficking
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule nucleotide,
    GTP
    protein
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS