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FLASH GENE
Symbol PRDM7 contributors: - updated : 22-03-2004
HGNC name PR domain containing 7
HGNC id 9351
Location 16q24.3      Physical location : 90.122.975 - 90.142.338
Genatlas name positive regulatory domain family protein 7
Synonym name PR-domain family protein 4
Synonym symbol(s) PFM4
DNA
TYPE functioning gene
STRUCTURE 4.00 kb     5 Exon(s)
10 Kb 5' upstream gene genomic sequence study
MAPPING cloned Y linked N status provisional
Physical map
DPEP1 16q24.3 dipeptidase 1 (renal) PCOLN3 16q24.3 procollagen (type III) N-endopeptidase FLJ31606 16q24.3 hypothetical protein FLJ31606 LOC388309 16 LOC388309 CDK10 16q24.3 cyclin-dependent kinase (CDC2-like) 10 MGC26885 16q24.3 hypothetical protein MGC26885 C16orf7 16q24 chromosome 16 open reading frame 7 ZFP276 16q24.3 zinc finger protein 276 homolog (mouse) FANCA 16q24.3 Fanconi anemia, complementation group A LOC197317 16q24.3 hypothetical LOC197317 Spir-2 16q24 Spir-2 protein KIAA1049 16q24.3 Spir-2 protein FLJ12547 16q24.3 hypothetical protein FLJ12547 MC1R 16q24.3 melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor) TUBB4 16q24.3 tubulin, beta, 4 FLJ20186 16q24.3 hypothetical protein FLJ20186 MGC13198 16q24.3 hypothetical protein MGC13198 MGC16385 16q24.3 hypothetical protein MGC16385 AFG3L1 16q24 AFG3 ATPase family gene 3-like 1 (yeast) MGC3101 16q24.3 hypothetical protein MGC3101 GAS8 16q24.3 growth arrest-specific 8 C16orf3 16q24.3 chromosome 16 open reading frame 3 PRDM7 16q24.3 PR domain containing 7 LOC197331 16q24.3 HSA16q24 beta-tubulin 4Q pseudogene LOC388311 16 LOC388311 LOC388312 16 hypothetical gene supported by AK128780 LOC388313 16 similar to bA476I15.3 (novel protein similar to septin)
RNA
TRANSCRIPTS type messenger
EXPRESSION
Type
constitutive of
   expressed in (based on citations)
organ(s)
cell lineage
cell lines
fluid/secretion
at STAGE
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
  • one SET domain
  • fourteen zinc finger DNA binding motifs, C2H2 type
  • one scan box domain
  • HOMOLOGY
    Homologene
    FAMILY
  • PR-domain protein family
  • krüppel family of C2H2 type zinc finger proteins
  • CATEGORY regulatory , transcription factor
    SUBCELLULAR LOCALIZATION     intracellular
    intracellular,nucleus
    CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA binding
    RNA
    small molecule metal binding,
    Zn2+
    protein
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS