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FLASH GENE
Symbol KCTD3 contributors: npt - updated : 24-02-2010
HGNC name potassium channel tetramerisation domain containing 3
HGNC id 21305
Location 1q41      Physical location : 215.740.734 - 215.795.147
Synonym name NY-REN-45 antigen
Synonym symbol(s) NY-REN-45
DNA
TYPE functioning gene
STRUCTURE 54.41 kb     18 Exon(s)
Genomic sequence alignment details
10 Kb 5' upstream gene genomic sequence study
MAPPING cloned Y linked N status provisional
Physical map
ATF3 1q32.3 activating transcription factor 3 FLJ32796 1q32.3 hypothetical protein FLJ32796 LOC388735 1 LOC388735 SNFT 1q32.3 Jun dimerization protein p21SNFT DC8 1q41 DKFZP566O1646 protein LOC388736 1 similar to ribosomal protein S5; 40S ribosomal protein S5 LOC149643 1q32.3 hypothetical LOC149643 FLVCR 1q32.1-q32.2 hypothetical LOC149643 FLJ12505 1q32.3 hypothetical protein FLJ12505 LOC90806 1q32.3 similar to RIKEN cDNA 2610307I21 RPS6KC1 1q41 ribosomal protein S6 kinase, 52kDa, polypeptide 1 LOC391161 1 similar to ribosomal protein L31 PROX1 1q32.2-q32.3 prospero-related homeobox 1 SMYD2 1q32.3 SET and MYND domain containing 2 PTPN14 1q32.2 protein tyrosine phosphatase, non-receptor type 14 CENPF 1q32-q41 centromere protein F, 350/400ka (mitosin) LOC391162 1 similar to Glyceraldehyde 3-phosphate dehydrogenase, liver (GAPDH) KCNK2 1q41 potassium channel, subfamily K, member 2 LOC391163 1 similar to Voltage-dependent anion-selective channel protein 1 (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin) KCTD3 1q41 potassium channel tetramerisation domain containing 3 LOC388737 1 similar to bA275K8.2 (novel protein with weak homology to human Usher syndrome type 2A and NGCAM-related cell adhesion molecule proteins and rat glomerular mesangial cell receptor protein-tyrosine phosphatase) LOC391164 1 similar to protein tyrosine phosphatase, receptor type, Q isoform 1 precursor; glomerular mesangial cell receptor protein-tyrosine phosphatase LOC200125 1q41 similar to laminin A-chain USH2A 1q41 Usher syndrome 2A (autosomal recessive, mild) MRPS18BP1 6q22.33 mitochondrial ribosomal protein S17 pseudogene 5 ESRRG 1q32 estrogen-related receptor gamma FLJ10252 1q41 hypothetical protein FLJ10252 LOC128153 1q41 hypothetical protein BC014608 UBBP2 1q32 ubiquitin B pseudogene 2 CGI-115 1q41 CGI-115 protein LOC391165 1 similar to 40S ribosomal protein S26 TGFB2 1q41 transforming growth factor, beta 2
RNA
TRANSCRIPTS type messenger
identificationnb exonstypebpproduct
ProteinkDaAAspecific expressionYearPubmed
18 - 3946 - 815 - -
EXPRESSION
Type
constitutive of
   expressed in (based on citations)
organ(s)
SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
Reproductivemale systemtestis   
cell lineage
cell lines
fluid/secretion
at STAGE
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
  • K+ channel tetramerisation domain
  • mono polymer heteromer , tetramer , complex
    HOMOLOGY
    Homologene
    FAMILY
  • KCTD3 family
  • CATEGORY antigen
    SUBCELLULAR LOCALIZATION
    basic FUNCTION
  • mihgt have voltage-gated K+ channel activity
  • CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS