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FLASH GENE
Symbol HIST1H2AA contributors: npt - updated : 05-08-2010
HGNC name histone cluster 1, H2aa
HGNC id 18729
Location 6p22.2      Physical location : 25.726.291 - 25.726.790
Synonym name
  • histone 1, H2aa
  • H2A histone family, member R
  • Synonym symbol(s) bA317E16.2, H2AFR, H2A/r
    DNA
    TYPE functioning gene
    SPECIAL FEATURE component of a cluster
    text component of the HIST1 cluster on chr 6p
    STRUCTURE 0.50 kb     1 Exon(s)
    10 Kb 5' upstream gene genomic sequence study
    text structure intronless gene
    MAPPING cloned Y linked N status provisional
    Physical map
    LRRC16 6p22.1 leucine rich repeat containing 16 SCGN 6p22.3-p22.1 secretagogin, EF-hand calcium binding protein HIST1H2AA 6p21 histone 1, H2aa HIST1H2BA 6p21 histone 1, H2ba SLC17A4 6p22-p21.3 solute carrier family 17 (sodium phosphate), member 4 SLC17A1 6p22-p21.3 solute carrier family 17 (sodium phosphate), member 1 SLC17A3 6p21.3 solute carrier family 17 (sodium phosphate), member 3 HIST1H2APS2 6p22 histone 1, H2a, pseudogene 2 SLC17A2 6p21.3 solute carrier family 17 (sodium phosphate), member 2 TRIM38 6p21.3 tripartite motif-containing 38 HIST1H1PS2 6p21.3 histone 1, H1, pseudogene 2 HIST1H1A 6p22-p21 histone 1, H1a HIST1H3A 6p21.3 histone 1, H3a HIST1H4A 6p21.3 histone 1, H4a HIST1H4B 6p21.3 histone 1, H4b HIST1H3B 6p21.3 histone 1, H3b HIST1H2AB 6p21.3 histone 1, H2ab
    RNA
    TRANSCRIPTS type messenger
    text transcripts contain a palindromic termination element
    identificationnb exonstypebpproduct
    ProteinkDaAAspecific expressionYearPubmed
    1 - 500 14.1 131 - -
    EXPRESSION
    Type
       expressed in (based on citations)
    organ(s)
    cell lineage
    cell lines
    fluid/secretion
    at STAGE
    PROTEIN
    PHYSICAL PROPERTIES
    STRUCTURE
    motifs/domains
    HOMOLOGY
    Homologene
    FAMILY
  • histone H2A family
  • CATEGORY structural protein , DNA associated
    SUBCELLULAR LOCALIZATION     intracellular
    intracellular,nucleus,chromatin/chromosome,nucleosome
    basic FUNCTION
  • nucleosome assembly activity
  • CELLULAR PROCESS nucleotide, chromatin organization, remodeling
    cell organization/biogenesis
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA binding
    RNA
    small molecule
    protein
  • HIV-1 Tat peptides binding
  • cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS