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FLASH GENE
Symbol GSG1 contributors: KTN/npt - updated : 25-08-2008
HGNC name germ cell associated 1
HGNC id 19716
Location 12p13.1      Physical location : 13.237.042 - 13.256.619
Synonym symbol(s) MGC3146, MGC111023
DNA
TYPE functioning gene
STRUCTURE 19.00 kb     8 Exon(s)
10 Kb 5' upstream gene genomic sequence study
MAPPING cloned Y linked N status provisional
RNA
TRANSCRIPTS type messenger
identificationnb exonstypebpproduct
ProteinkDaAAspecific expressionYearPubmed
6 splicing 2066 31.3 285 - Clark (03)
6 splicing 1942 36.6 326 - Clark (03)
  • using an alternate splice site compared to variant 1, that results in a frameshift
  • 7 splicing 2179 35 321 - Clark (03)
  • including an alternate in-frame exon in the coding region compared to variant 1
  • 7 splicing 2055 40 362 - Clark (03)
  • having multiple differences in the coding region compared to variant 1, that result in a frameshift
  • EXPRESSION
    Type
    constitutive of
       expressed in (based on citations)
    organ(s)
    SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
    Nervousbrain   moderately
    Reproductivemale systemtestis  highly
    Visualeye   predominantly
    cell lineage
    cell lines
    fluid/secretion
    at STAGE
    PROTEIN
    PHYSICAL PROPERTIES
    STRUCTURE
    motifs/domains
    HOMOLOGY
    interspecies homolog to dog GSG1 (79 pc)
    homolog to chimpanzee GSG1 (96.6 pc)
    homolog to rattus Gsg1 (73.8 pc)
    homolog to murine Gsg1 (75.1 pc)
    Homologene
    FAMILY
  • GSG1 family
  • CATEGORY unknown/unspecified
    SUBCELLULAR LOCALIZATION     intracellular
    intracellular,cytoplasm,organelle,membrane
    intracellular,cytoplasm,organelle,endoplasmic reticulum ,rough,smooth
    basic FUNCTION
  • may cause the redistribution of PAPOLB from the cytosol to the endoplasmic reticulum
  • CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein
  • interacting with PAPOLB
  • cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS