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FLASH GENE
Symbol GALNT9 contributors: mct - updated : 10-06-2011
HGNC name UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)
HGNC id 4131
Location 12q24.33      Physical location : 132.680.917 - 132.905.905
Synonym name
  • polypeptide N-acetylgalactosaminyltransferase 9
  • pp-GaNTase 9
  • protein-UDP acetylgalactosaminyltransferase 9
  • Synonym symbol(s) GALNAC-T9, PPGANTASET9
    EC.number 2.4.1.41
    DNA
    TYPE functioning gene
    STRUCTURE 155.21 kb     11 Exon(s)
    10 Kb 5' upstream gene genomic sequence study
    MAPPING cloned Y linked N status provisional
    Physical map
    EPIM 7q34-qter epimorphin RAN 6p21.3 RAN, member RAS oncogene family LOC390367 12 LOC390367 LOC390368 12 similar to MAL13P1.296 GPR133 12q24.33 G protein-coupled receptor 133 LOC390369 12 similar to 40S ribosomal protein S6 (Phosphoprotein NP33) LOC338797 12q24.33 hypothetical protein LOC338797 LOC387896 12 LOC387896 LOC387897 12 LOC387897 LOC390370 12 similar to 40S ribosomal protein S6 (Phosphoprotein NP33) SFRS8 12q24.33 splicing factor, arginine/serine-rich 8 (suppressor-of-white-apricot homolog, Drosophila) MMP17 12q24.33 matrix metalloproteinase 17 (membrane-inserted) ULK1 12q24.3 unc-51-like kinase 1 (C. elegans) LOC387898 12 LOC387898 PUS1 12q24.33 pseudouridylate synthase 1 EP400 12q24.33 E1A binding protein p400 FLJ33915 12q24.33 hypothetical protein FLJ33915 DDX51 12q24.33 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 MGC3162 12q24.33 hypothetical protein MGC3162 GALNT9 12q24.33 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9) LOC390371 12 similar to proline rich protein 2 P2RX2 12q24.33 purinergic receptor P2X, ligand-gated ion channel, 2 POLE 12q24.3 polymerase (DNA directed), epsilon PXMP2 12q24.33 peroxisomal membrane protein 2, 22kDa MGC5352 12q24.33 hypothetical protein MGC5352 GOLGA3 12q24.33 golgi autoantigen, golgin subfamily a, 3 CHFR 12q24.33 checkpoint with forkhead and ring finger domains LOC90462 12q24.33 hypothetical protein LOC90462 ZNF26 12q24.33 zinc finger protein 26 (KOX 20) ZNF84 12q24.33 zinc finger protein 84 (HPF2) ZNF140 12q24.32-q24.33 zinc finger protein 140 (clone pHZ-39) ZNF10 12q24.33 zinc finger protein 10 (KOX 1) ZNF268 5q11.2-24.3 zinc finger protein 268
    RNA
    TRANSCRIPTS type messenger
    identificationnb exonstypebpproduct
    ProteinkDaAAspecific expressionYearPubmed
    11 - 2680 68 603 - 2010 20977886
    - - 1744 27 237 - 2010 20977886
    EXPRESSION
    Type widely
    constitutive of
       expressed in (based on citations)
    organ(s)
    SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
    Nervousbrain   specific Homo sapiens
     brainhindbraincerebellum highly
    Reproductivemale systemprostate  moderately
    Urinarykidney   moderately
    cell lineage
    cell lines
    fluid/secretion
    at STAGE
    PROTEIN
    PHYSICAL PROPERTIES
    STRUCTURE
    motifs/domains
  • near the N terminus, a stem region, a lumenal catalytic domain
  • a GT1 motif and Ga1/Ga1 NAc transferase motif
  • a C terminal ricin/lectin-like domain
  • a QXW lectin repeat
  • HOMOLOGY
    interspecies homolog to C.elegans Gly5
    Homologene
    FAMILY
  • glycosyltransferase 2 family
  • GalNAc-T subfamily
  • CATEGORY enzyme
    SUBCELLULAR LOCALIZATION     intracellular
    intracellular,cytoplasm,organelle,membrane
    intracellular,cytoplasm,organelle,Golgi
    text type 2 transmembrane protein
    basic FUNCTION
  • catalyzing the initial reaction in O-linked (mucin type) oligosaccharide biosynthesis
  • CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism carbohydrate
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule cofactor,
  • Ca2+
  • Mn2+
  • protein
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS