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FLASH GENE
Symbol FIBCD1 contributors: npt/ - updated : 14-09-2004
HGNC name fibrinogen C domain containing 1
HGNC id 25922
Location 9q34.12      Physical location : 133.777.825 - 133.814.455
Synonym symbol(s) FLJ14810
DNA
TYPE functioning gene
STRUCTURE 36.00 kb     7 Exon(s)
MAPPING cloned Y linked N status provisional
Physical map
LOC389794 9 LOC389794 LOC375759 9q34.2 hypothetical protein LOC375759 AD-003 9q34.2 AD-003 protein ASB6 9q34.13 ankyrin repeat and SOCS box-containing 6 PRRX2 9q34.1 paired related homeobox 2 PTGES 9q34.3 prostaglandin E synthase TOR1B 9q34 torsin family 1, member B (torsin B) LOC51759 DYT1 9q34 dystonia 1, torsion (autosomal dominant; torsin A) USP20 9q34.12-q34.13 ubiquitin specific protease 20 FNBP1 9q34 formin binding protein 1 GPR107 9q34.2 G protein-coupled receptor 107 LOC389795 9 similar to GCDRP FREQ 9q34 frequenin homolog (Drosophila) LOC392395 9 similar to hemicentin DKFZp434P0216 9q34.2 hemicentin-2 LOC389796 9 similar to CDNA sequence BC034076 LOC389797 9 similar to cDNA sequence BC034076 ASS 9q34.13 argininosuccinate synthetase PRDM12 9q33-q34 PR domain containing 12 RRP4 9q34 homolog of Yeast RRP4 (ribosomal RNA processing 4), 3'-5'-exoribonuclease ABL1 9q34.13 v-abl Abelson murine leukemia viral oncogene homolog 1 P518 9q34.2 P518 precursor protein FIBCD1 9q34.2 fibrinogen C domain containing 1 LAMC3 9q31-q34 laminin, gamma 3 C9orf58 9q34.13-q34.3 chromosome 9 open reading frame 58 NUP214 9q34.1-q34.2 nucleoporin 214kDa C9orf59 9q34 chromosome 9 open reading frame 59 C9orf67 9q34.2-q34.3 chromosome 9 open reading frame 67 LOC389798 9 similar to mKIAA0515 protein POMT1 9q34.1 protein-O-mannosyltransferase 1 UCK1 9q34.2 protein-O-mannosyltransferase 1 GRF2 9q34.3 guanine nucleotide-releasing factor 2 (specific for crk proto-oncogene) CRSP8 9q34.3 cofactor required for Sp1 transcriptional activation, subunit 8, 34kDa NTNG2 9q34 netrin G2 KIAA0625 9q25.3-q34.1 netrin G2
RNA
TRANSCRIPTS type messenger
identificationnb exonstypebpproduct
ProteinkDaAAspecific expressionYearPubmed
7 - 3257 - 461 - -
8 - 3119 - 461 - -
EXPRESSION
Type
   expressed in (based on citations)
organ(s)
SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
Digestiveintestinesmall intestine   
 intestinelarge intestinecolon  
Urinarykidney    
cell lineage
cell lines
fluid/secretion
at STAGE
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
  • a coiled-coil region
  • a polycationic region
  • a C-terminal fibrinogen-related domain (Schlosser 2009)
  • mono polymer homomer , tetramer
    HOMOLOGY
    interspecies homolog to rattus LOC311861
    homolog to murine Fibcd1
    Homologene
    FAMILY
    CATEGORY secretory , structural protein
    SUBCELLULAR LOCALIZATION extracellular
    text
  • secreted
  • type II transmembrane
  • basic FUNCTION
  • may play an important role in controlling the exposure of intestine to chitin (Schlosser 2009)
  • CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS immunity/defense
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS