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FLASH GENE
Symbol COL28A1 contributors: mct/npt - updated : 30-11-2009
HGNC name collagen, type XXVIII, alpha 1
HGNC id 22442
Location 7p21.3      Physical location : 7.398.243 - 7.575.460
Synonym name
  • alpha 2 type VI collagen-like
  • collagen alpha-1(XXVIII) chain
  • Synonym symbol(s) COL28
    DNA
    TYPE functioning gene
    STRUCTURE 177.22 kb     35 Exon(s)
    MAPPING cloned Y linked N status provisional
    RNA
    TRANSCRIPTS type messenger
    identificationnb exonstypebpproduct
    ProteinkDaAAspecific expressionYearPubmed
    35 - 3515 116.53 1125 - Veit (2006)
    EXPRESSION
    Type restricted
       expressed in (based on citations)
    organ(s)
    SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
    Nervousgangliasensory gangliadorsal root predominantly
     nervespinal nervesciatic  
    cell lineage
    cell lines
    fluid/secretion
    at STAGE
    PROTEIN
    PHYSICAL PROPERTIES
    STRUCTURE
    motifs/domains
  • an N-terminal signal peptide
  • a VWA domain
  • a central collagenous domain containing several very short interruptions arranged in a repeat pattern (Veit 2006)
  • a second VWA domain, a unique region
  • a C-terminal Kunitz-type serine protease inhibitor domain
  • HOMOLOGY
    Homologene
    FAMILY
  • VWA-containing collagen family
  • CATEGORY structural protein
    SUBCELLULAR LOCALIZATION extracellular
    text basememnt membrane
    basic FUNCTION
  • protein persisting for an extended period after synthesis (Veit 2006)
  • CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS