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FLASH GENE
Symbol COL24A1 contributors: - updated : 20-07-2005
HGNC name collagen, type XXIV, alpha 1
HGNC id 20821
Location 1p22.3-p22.2      Physical location : 86.194.917 - 86.622.121
DNA
TYPE functioning gene
STRUCTURE 427.00 kb     62 Exon(s)
Genomic sequence alignment details
10 Kb 5' upstream gene genomic sequence study
MAPPING cloned Y linked N status provisional
Physical map
LOC391051 1 similar to urate oxidase (EC 1.7.3.3) - baboon DLAD 1p31.1 similar to urate oxidase (EC 1.7.3.3) - baboon RPF1 1p22.3 similar to urate oxidase (EC 1.7.3.3) - baboon GNG5 1p22 guanine nucleotide binding protein (G protein), gamma 5 SPATA1 1p22.3 spermatogenesis associated 1 CTBS 1p22 chitobiase, di-N-acetyl- FLJ35487 1p22.3 hypothetical protein FLJ35487 SSX2IP 1p22 synovial sarcoma, X breakpoint 2 interacting protein EDG7 1p22.3-p31.1 endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 7 MCOLN2 1p22 mucolipin 2 MCOLN3 1p22.3 mucolipin 3 NYD-SP29 1p22.3 testis development protein NYD-SP29 FLJ13815 1p22.3 hypothetical protein FLJ13815 gm117 1p22.3 gm117 BCL10 1p22 B-cell CLL/lymphoma 10 DDAH1 1p22 dimethylarginine dimethylaminohydrolase 1 CYR61 1p31.p22 cysteine-rich, angiogenic inducer, 61 FLJ20729 1p22.3 hypothetical protein FLJ20729 COL24A1 1p22.3-p22.2 collagen, type XXIV, alpha 1 KIAA1229 1p22.3 KIAA1229 protein CLCA2 1p31-p22 chloride channel, calcium activated, family member 2 CLCA1 1p31-p22 chloride channel, calcium activated, family member 1 CLCA4 1p31-p22 chloride channel, calcium activated, family member 4 CLCA3 1p31-p22 chloride channel, calcium activated, family member 3 SH3GLB1 1p22 SH3-domain GRB2-like endophilin B1 LOC391052 1 similar to dJ612B15.1 (novel protein similar to 60S ribosomal protein L17 (RPL17)) SEP15 1p31 similar to dJ612B15.1 (novel protein similar to 60S ribosomal protein L17 (RPL17)) HS2ST1 1p31.1-p22.1 heparan sulfate 2-O-sulfotransferase 1
RNA
TRANSCRIPTS type messenger
EXPRESSION
Type
constitutive of
   expressed in (based on citations)
organ(s)
cell lineage
cell lines
fluid/secretion
at STAGE
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
  • a non collagenous domain (NC1)
  • a long triple helical domain flanked by typical propeptide-like sequences
  • a thrombospondin N-terminal like domains
  • eight conserved cysteine residues at the C-terminus
  • mono polymer heteromer , trimer
    HOMOLOGY
    interspecies homolog to murine Col24a1
    Homologene
    FAMILY collagen family
    CATEGORY adhesion
    SUBCELLULAR LOCALIZATION extracellular
    text extracellular matrix
    basic FUNCTION
  • may contribute to the regulation of type I collagen fibrillogenesis at specific anatomical location during fetal development
  • CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component trimer composed of two COL24A1 and one COL24A2
    INTERACTION
    DNA
    RNA
    small molecule
    protein
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS