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FLASH GENE
Symbol COL22A1 contributors: - updated : 16-02-2004
HGNC name collagen, type XXII, alpha 1
HGNC id 22989
Location 8q24.3      Physical location : 139.600.478 - 139.926.236
DNA
TYPE functioning gene
STRUCTURE 325.00 kb     66 Exon(s)
10 Kb 5' upstream gene genomic sequence study
MAPPING cloned Y linked N status provisional
RNA
TRANSCRIPTS type messenger
EXPRESSION
Type
constitutive of
   expressed in (based on citations)
organ(s)
SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
Nervousbrain    
tissue
SystemTissueTissue level 1Tissue level 2LevelPubmedSpeciesStageRna symbol
Connectivecartilage   
Muscularstriatumskeletal  
Muscularstriatumcardiac  
cell lineage
cell lines
fluid/secretion
at STAGE
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
  • von Willebrand factor type A (VWFA) domain
  • thrombospondin N-terminal-like domain
  • collagen triple helix repeat motifs
  • HOMOLOGY
    Homologene
    FAMILY FACIT protein family, collagen superfamily
    CATEGORY adhesion , structural protein
    SUBCELLULAR LOCALIZATION     plasma membrane,junction
    text deposited in the basement membrane zone of the myotendinous junction and the hair follicle and associated with the extrafibrillar matrix in cartilage
    basic FUNCTION
  • structural molecule activity
  • acting as a cell adhesion ligand for skin epithelial cells and fibroblasts
  • CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS