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FLASH GENE
Symbol CLRN2 contributors: KTN/npt - updated : 29/09/2008
HGNC name clarin 2
HGNC id 33939
Location 4p15.32      Physical location : 17.516.787 - 17.528.727
Synonym name Usher syndrome 3A-like
DNA
TYPE functioning gene
STRUCTURE 11.94 kb     3 Exon(s)
MAPPING cloned Y linked N status provisional
RNA
TRANSCRIPTS type messenger
identificationnb exonstypebpproduct
ProteinkDaAAspecific expressionYearPubmed
3 - 823 25.3 232 - -
EXPRESSION
Type
   expressed in (based on citations)
organ(s)
cell lineage
cell lines
fluid/secretion
at STAGE
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
conjugated GlycoP
HOMOLOGY
interspecies homolog to dog CLRN2 (96.1 pc)
homolog to chimpanzee CLRN2 (98.3 pc)
homolog to cow CLRN2 (93.5 pc)
homolog to rattus Clrn2 (93.5 pc)
homolog to murine Clrn2 (87.1 pc)
Homologene
FAMILY
  • clarin family
  • CATEGORY unknown/unspecified
    SUBCELLULAR LOCALIZATION     plasma membrane
    text
  • integral to membrane
  • multi-pass membrane protein
  • basic FUNCTION
  • may play a role for clarin-1 in hair cell and photoreceptor cell synapses
  • CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling neurotransmission
    sensory synapses
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS