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FLASH GENE
Symbol BCAS1 contributors: - updated : 25-11-2004
HGNC name breast carcinoma amplified sequence 1
HGNC id 974
Location 20q13.2      Physical location : 52.560.078 - 52.687.304
Synonym name amplified and overexpressed in breast cancer
Synonym symbol(s) NABC1, AIBC1, AMPBR1
DNA
TYPE functioning gene
STRUCTURE 126.00 kb     12 Exon(s)
10 Kb 5' upstream gene genomic sequence study
MAPPING cloned Y linked   status provisional
Map cen - HCK - GNRH2 - RPN2 - SRC - TOP1 - ADA ADA ADA ADA /SEMG1 ,SEMG2 - [PTPN1 - MC3R - PCK1 ] - GNAS /CHRNA4 - EDN3 - ZNF8 - qter
Authors Tanner (97)
Text [critical region of amplication]
Physical map
NFATC2 20q13.2-q13.31 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 ATP9A 20q13.1-q13.2 ATPase, class II, type 9A SALL4 20q13.13-q13.2 sal-like 4 (Drosophila) ERP28P 20q13.13 endoplasmic reticulum lumenal protein 28 pseudogene ZFP64 20q13.13 zinc finger protein 64 homolog (mouse) MRPS33P4 20q13.13 mitochondrial ribosomal protein S33 pseudogene 4 RPL36P1 20q13 ribosomal protein L36 pseudogene 1 C20orf17 20q13.2 chromosome 20 open reading frame 17 PPIAL2 20q13.2-q13.3 peptidylprolyl isomerase A (cyclophilin A)-like 2 ZNF217 20q13.2 zinc finger protein 217 LOC391257 20 similar to Chain  , Structure Determination Of The Small Ubiquitin-Related Modifier Sumo-1, Nmr, 10 Structures BCAS1 20q13.2 breast carcinoma amplified sequence 1 CYP24A1 20q13.2-q13.3 cytochrome P450, family 24, subfamily A, polypeptide 1 PFDN4 7p22 prefoldin 4 DOK5 20q13.2 docking protein 5 RPL12P4 20q13.2 ribosomal protein L12 pseudogene 4 CBLNL1 20q13.13-q13.33 cerebellin precursor-like 1 MC3R 20q13.2-q13.3 melanocortin 3 receptor C20orf108 20q13.2 chromosome 20 open reading frame 108 STK6 20q13.31 serine/threonine kinase 6 CSTF1 20q13.2-q13.3 cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa C20orf32 20q13.31 chromosome 20 open reading frame 32 RPL39P 20q13.2 ribosomal protein L39 pseudogene C20orf43 20q13.31 chromosome 20 open reading frame 43
RNA
TRANSCRIPTS type messenger
text an alternative spliced variant NABC1 5B
EXPRESSION
Type
constitutive of
   expressed in (based on citations)
organ(s)
SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
Digestiveintestinelarge intestinecolon  
 intestinelarge intestinerectum  
Nervousbraindiencephalonhypothalamus  
 braindiencephalonamygdala  
Reproductivefemale systembreast   
 male systemprostate   
tissue
SystemTissueTissue level 1Tissue level 2LevelPubmedSpeciesStageRna symbol
Epithelial    
cell lineage
cell lines breast cancer cell lines
fluid/secretion
at STAGE
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
HOMOLOGY
Homologene
FAMILY
CATEGORY protooncogene
SUBCELLULAR LOCALIZATION     intracellular
intracellular,cytoplasm
basic FUNCTION unknown
CELLULAR PROCESS
PHYSIOLOGICAL PROCESS
PATHWAY
metabolism
signaling
a component
INTERACTION
DNA
RNA
small molecule
protein
cell & other
REGULATION
ASSOCIATED DISORDERS
corresponding disease(s)
Other morbid association(s)
TypeGene ModificationChromosome rearrangementProtein expressionProtein Function
    amplification    
in agressive breast cancer
Susceptibility
Variant & Polymorphism
Candidate gene
Marker
Therapy target
ANIMAL & CELL MODELS