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FLASH GENE
Symbol AHDC1 contributors: mct - updated : 12-05-2014
HGNC name AT hook, DNA binding motif, containing 1
HGNC id 25230
Corresponding disease
MRSSA mental retardation, sleep apnea
Location 1p36.11      Physical location : 27.860.793 - 27.930.143
Synonym symbol(s) CL23945, DJ159A19.3, RP1-159A19.1
DNA
TYPE functioning gene
STRUCTURE 69.71 kb     7 Exon(s)
MAPPING cloned Y linked N status provisional
RNA
TRANSCRIPTS type messenger
identificationnb exonstypebpproduct
ProteinkDaAAspecific expressionYearPubmed
7 - 6512 168 1603 - 2004 1514619
EXPRESSION
Type
   expressed in (based on citations)
organ(s)
SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
Lymphoid/Immunespleen    
Respiratoryrespiratory tractlarynx   
cell lineage
cell lines
fluid/secretion
at STAGE
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
  • the VWFC domain
  • two AT-hook DNA-binding motifs located at codons 396408 and 544556, contained in conserved region 1 (AT-hook domains are DNA-binding motifs that act to fasten proteins to AT-rich sequences in DNA)
  • secondary structure trimers of one alpha 2(i) and two alpha 1(i) chains
    HOMOLOGY
    Homologene
    FAMILY
  • fibrillar collagen family
  • CATEGORY unknown/unspecified
    SUBCELLULAR LOCALIZATION
    basic FUNCTION unknown
    CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    corresponding disease(s) MRSSA
    Susceptibility
    Variant & Polymorphism
    Candidate gene
    Marker
    Therapy target
    ANIMAL & CELL MODELS