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FLASH GENE
Symbol COL21A1 contributors: npt/ - updated : 24-05-2002
HGNC name collagen, type XXI, alpha 1
HGNC id 17025
EXPRESSION
Type
   expressed in (based on citations)
organ(s)
SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
Cardiovascularvessels    
Digestiveintestinelarge intestinecolon moderately
 mouth    
 salivary gland    
 stomach    
Nervousbrain   moderately
 spinal cord    
Reproductivefemale systemuterus  highly
 male systemtestis  highly
 male systemprostate  moderately
Respiratorylung   moderately
 respiratory tracttrachea   
tissue
SystemTissueTissue level 1Tissue level 2LevelPubmedSpeciesStageRna symbol
Connectivebone   
Connectivecartilage   
Epithelialsecretoryglandular  
Muscularsmooth   
Nervouscentral   
cell lineage
cell lines
fluid/secretion
at STAGE
physiological period pregnancy
Text placenta
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
  • fibril associated collagen with interrupted helices (FACIT)
  • N terminal thrombospondin-like domain
  • vW factor type A domain
  • collagen triple helix repeats
  • conjugated GlycoP
    mono polymer homomer , trimer
    HOMOLOGY
    Homologene
    FAMILY
  • fibril-associated collagens with interrupted helices (FACIT) family
  • CATEGORY adhesion , structural protein
    SUBCELLULAR LOCALIZATION extracellular
    text extracellular matrix, component of the blood vessel walls
    basic FUNCTION
  • contributing to the extracellular matrix assembly of the vascular meshwork during blood vessel formation
  • CELLULAR PROCESS cell organization/biogenesis
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein
  • COL I
  • cell & other
    REGULATION
    Other regulated by PDGF
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS