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FLASH GENE
Symbol LSM6 contributors: - updated : 30-05-2005
HGNC name LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
HGNC id 17017
RNA
TRANSCRIPTS type messenger
EXPRESSION
Type
constitutive of
   expressed in (based on citations)
organ(s)
SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
Cardiovascularheart    
Lymphoid/Immunelymph node    
Nervous     
cell lineage
cell lines
fluid/secretion
at STAGE
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
  • SM sequence motif, which consists of 2 regions separated by a linker of variable length that folds as a loop
  • HOMOLOGY
    interspecies ortholog to rattus LOC498934
    Homologene
    FAMILY snRNP SM proteins family
    CATEGORY RNA associated
    SUBCELLULAR LOCALIZATION     intracellular
    intracellular,nucleus
    basic FUNCTION
  • may play a role in U4/U6 snRNP formation
  • may form a stable heteromer present in tri-snRNP particles which are important for pre-mRNA binding
  • CELLULAR PROCESS nucleotide, RNA splicing
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA binding to the U6 snRNA
    small molecule
    protein
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS