Selected-GenAtlas references SOURCE GeneCards NCBI Gene Swiss-Prot Ensembl
HGNC UniGene Nucleotide OMIM UCSC
Home Page
FLASH GENE
Symbol CSE1L contributors: mct - updated : 23-08-2014
HGNC name CSE1 chromosome segregation 1-like (yeast)
HGNC id 2431
DNA
TYPE functioning gene
STRUCTURE 50.71 kb     25 Exon(s)
10 Kb 5' upstream gene genomic sequence study
MAPPING cloned Y linked   status provisional
Map cen - SRC - TOP1 - ADA ADA - SEMG1 - CSE1L - PTPN1 - MC3R - PCK1 - GNAS - EDN3 - qter
Authors Brinkmann (96)
Physical map
PRKCBP1 20q12-q13.1 protein kinase C binding protein 1 RPL35AP 20q12-q13.1 ribosomal protein L35a pseudogene NCOA3 20q12 nuclear receptor coactivator 3 SULF2 20q12-q13.1 Homo sapiens similar to glucosamine-6-sulfatases (SULF2), mRNA. SRMP1 20q13.13 spermidine synthase pseudogene 1 LOC388798 20 LOC388798 PREX1 20q12-q13 LOC388798 ARFGEF2 20q13.13 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) SNAP23P 20 synaptosomal-associated protein, 23kDa pseudogene CSE1L 20q13 CSE1 chromosome segregation 1-like (yeast) STAU 20q13.1 staufen, RNA binding protein (Drosophila) ARPC3B 20q13.13 actin related protein 2/3 complex, subunit 3B, 21kDa DDX27 20q13.13 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 KIAA1404 20q13.13 KIAA1404 protein KCNB1 20q13.1 potassium voltage-gated channel, Shab-related subfamily, member 1 PTGIS 20q13.1-q13.3 prostaglandin I2 (prostacyclin) synthase B4GALT5 20q13.1-q13.2 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 SNRPFP1 20 small nuclear ribonucleoprotein polypeptide F pseudogene 1 SLC9A8 20q13.13 solute carrier family 9 (sodium/hydrogen exchanger), isoform 8 SPATA2 20q13.1-q13.2 spermatogenesis associated 2 ZNF313 20q13.13 zinc finger protein 313 LOC391256 20 similar to Keratin, type I cytoskeletal 18 (Cytokeratin 18) (K18) (CK 18) SNAI1 20q13.2 snail homolog 1 (Drosophila) LOC149738 20q13.13 hypothetical LOC149738 UBE2V1 20q13.2 ubiquitin-conjugating enzyme E2 variant 1 CEBPB 20q13.1 CCAAT/enhancer binding protein (C/EBP), beta COX6CP2 20 cytochrome c oxidase subunit VIc pseudogene 2 PTPN1 20q13.1-q13.2 protein tyrosine phosphatase, non-receptor type 1 LOC200230 20q13.13 similar to KIAA0386 C20orf175 20 chromosome 20 open reading frame 175 RPL36P2 20q13.1 ribosomal protein L36 pseudogene 2 PARD6B 20q13.13 par-6 partitioning defective 6 homolog beta (C. elegans) BCAS4 20q13.13-q13.2 breast carcinoma amplified sequence 4 TMSL6 20 thymosin-like 6 ADNP 20q13.3-q13.2 activity-dependent neuroprotector
RNA
TRANSCRIPTS type messenger
text several tissue specific and developmental stage specific isoforms
identificationnb exonstypebpproduct
ProteinkDaAAspecific expressionYearPubmed
25 - 3627 - 971 - 1999 10331944
24 - 3459 - 915 - 1999 10331944
EXPRESSION
Type ubiquitous
   expressed in (based on citations)
organ(s)
SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
Digestiveintestinelarge intestinecolon highly Homo sapiens
 mouthtongue  highly
Reproductivemale systemtestis  highly
Respiratoryrespiratory tracttrachea  highly
cells
SystemCellPubmedSpeciesStageRna symbol
 proliferating cell
Digestiveepithelial cell Homo sapiens
Digestivegoblet Homo sapiens
cell lineage
cell lines
fluid/secretion
at STAGE
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
a nuclear localization signal (NLS)
HOMOLOGY
interspecies homolog to yeast chromosome segregation gene 1 (CSE1)
Homologene
FAMILY CSEL family
CATEGORY regulatory , transport
SUBCELLULAR LOCALIZATION     plasma membrane
    intracellular
intracellular,cytoplasm
intracellular,nucleus
text shuttles between the nucleus and the cytoplasm
basic FUNCTION
  • involved in the cell cycle of mammalian cells and in apoptosis
  • transport factor necessary for recycling of importin-alpha from the nucleus to the cytoplasm
  • associating with a subset of p53 target promoters, cooperating with p53 to activate transcription of these genes by altering histone modification, specifically histone H3 lysine 27
  • regulates the secretion of colorectal cells and may rgulate the metastasis of colorectal cancer
  • may be involved in the "early" and "late" metastasis of tumor cells in tumorigenesis
  • required for the expression of genes promoting invasion and metastasis
  • CELLULAR PROCESS cell life, proliferation/growth
    cell life, cell death/apoptosis
    nucleotide, transcription, regulation
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism cofactor
    signaling
    cofactor of p53
    a component
    INTERACTION
    DNA binding to chromatin
    RNA
    small molecule
    protein
  • binds strongly to NLS-free importin-alpha, and this binding is released in the cytoplasm by the combined action of RANBP1 and RANGAP1
  • is a negative regulator of CFTR-dependent fluid secretion
  • cell & other
    REGULATION
    ASSOCIATED DISORDERS
    corresponding disease(s)
    Other morbid association(s)
    TypeGene ModificationChromosome rearrangementProtein expressionProtein Function
    tumoral     --over  
    in ovarian cancer (pMID: 23948303)
    Susceptibility
    Variant & Polymorphism
    Candidate gene
    Marker
  • urinary CSE1L deserves further evaluation for the screening of bladder cancer
  • immunohistochemical staining of nuclear CSE1L may be useful for the prognosis of bladder urothelial carcinomas
  • Therapy target
    ANIMAL & CELL MODELS