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FLASH GENE
Symbol FXYD6 contributors: mct - updated : 08-02-2011
HGNC name FXYD domain containing ion transport regulator 6
HGNC id 4030
DNA
TYPE functioning gene
STRUCTURE 40.45 kb     10 Exon(s)
10 Kb 5' upstream gene genomic sequence study
MAPPING cloned Y linked N status confirmed
RNA
TRANSCRIPTS type messenger
identificationnb exonstypebpproduct
ProteinkDaAAspecific expressionYearPubmed
8 - 2057 - 95 - 2000 10950925
9 - 2133 - 95 - -
9 - 2154 - 95 - -
10 - 2230 - 95 - -
8 - 1749 - 95 - -
EXPRESSION
Type ubiquitous
   expressed in (based on citations)
organ(s)
SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
Nervousbrainforebraincerebral cortexfrontal cortexhighly Homo sapiens
 braindiencephalonhypothalamus highly Homo sapiens
 braindiencephalonamygdala highly Homo sapiens
 nerve   highly
Reproductivefemale systemovary  highly
tissue
SystemTissueTissue level 1Tissue level 2LevelPubmedSpeciesStageRna symbol
Connectiveadipose  highly
cell lineage
cell lines
fluid/secretion
at STAGE
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
  • a signal peptide
  • a core motif of 35 invariant conserved amino-acid centered on a single transmembrane span
  • 0-glycosylated extracellular domain (Ser-Thr-Pro rich domain)
  • short cytoplasmic tail
  • HOMOLOGY
    Homologene
    FAMILY
  • family of small membrane proteins (FXYD family)
  • CATEGORY regulatory , transport channel
    SUBCELLULAR LOCALIZATION extracellular
        plasma membrane
    basic FUNCTION
  • involved in the control of ion transport
  • may play an important role in neuronal excitability of the CNS during postnatal development and in the adult brain
  • may play a role in endolymph composition
  • modulates the kinetic activity of Na,K-ATPase and has long-term physiological importance in maintaining cation homeostasis
  • CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    corresponding disease(s)
    Susceptibility to schizophrenia (SCZD2)
    Variant & Polymorphism SNP (SNP) markers localized within or near the FXYD6 gene showed empirically significant allelic associations with schizophrenia
    Candidate gene
    Marker
    Therapy target
    ANIMAL & CELL MODELS