Selected-GenAtlas references SOURCE GeneCards NCBI Gene Swiss-Prot Ensembl
HGNC UniGene Nucleotide OMIM UCSC
Home Page
FLASH GENE
Symbol ODF1 contributors: mct/npt - updated : 16/09/2008
HGNC name outer dense fiber of sperm tails 1
HGNC id 8113
Location 8q22.3      Physical location : 103.563.847 - 103.573.245
Synonym name outer dense fiber of sperm tails, 27-kD
Synonym symbol(s) ODF, RT7, ODFP, SODF, ODFPG, HSPB10, MGC129928, MGC129929, ODF27, ODF2, ODFPGA, ODFPGB,
DNA
TYPE functioning gene
STRUCTURE 9.38 kb     2 Exon(s)
10 Kb 5' upstream gene genomic sequence study
regulatory sequence Promoter (TATA box)
text structure . 5′ flanking regions contain putative TATA boxes and cAMP-response elements (CREs), but the TATA boxes and CREs exhibit gene-specific sequences, and an overwhelming majority of CREs differ from the consensus sequence
MAPPING cloned Y linked N status provisional
RNA
TRANSCRIPTS type messenger
identificationnb exonstypebpproduct
ProteinkDaAAspecific expressionYearPubmed
2 - 1007 28.4 250 - Zarsky (2003)
EXPRESSION
Type restricted
   expressed in (based on citations)
organ(s)
SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
Reproductivemale systemtestis   
cells
SystemCellPubmedSpeciesStageRna symbol
Reproductivesperm cell
cell lineage
cell lines
fluid/secretion
at STAGE
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
  • leucine zipper motif
  • C-terminal C-X-P repeats
  • HOMOLOGY
    Homologene
    FAMILY
    CATEGORY structural protein
    SUBCELLULAR LOCALIZATION     intracellular
    intracellular,cytoplasm,cytoskeleton
    text sperm tail
    basic FUNCTION
  • may be helping to maintain the passive elastic structures and elastic recoil of the sperm
  • encodes an abundant protein in the outer dense fibers of the sperm tail, is repressed briefly before translation is activated in round spermatids
  • CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS reproduction/sex
    PATHWAY
    metabolism
    signaling
    a component
  • constituent of the filamentous structures of the sperm tail
  • INTERACTION
    DNA
    RNA
    small molecule
    protein
  • testis-specific proteins and with SPAG4 (leucine zipper motif)
  • cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS