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FLASH GENE
Symbol ZNF80 contributors: - updated : 19-05-2006
HGNC name zinc finger protein 80 (pT17)
HGNC id 13155
Location 3q13.3      Physical location : 113.953.480 - 113.956.425
Synonym symbol(s) pT17
DNA
TYPE functioning gene
SPECIAL FEATURE overlapping
text LTR of an endogenous retroviral element
STRUCTURE 2.00 kb     2 Exon(s)
10 Kb 5' upstream gene genomic sequence study
motif Viral sequence   long terminal repeat
text structure driven by solitary LTR of ERV9 family, the LTR acts as a promoter
MAPPING cloned Y linked   status confirmed
Map 5' - ERV9 - ZNF80 - 3'
Authors Di Cristofano (95)
regionally located in a region involved in chromosome rearrangements associated with myeloid disorders
RNA
TRANSCRIPTS type messenger
EXPRESSION
Type
constitutive of
   expressed in (based on citations)
organ(s)
SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
Respiratorylung    
cell lineage myeloid,hematopoietic cell lineage
cell lines
fluid/secretion
at STAGE
PROTEIN
PHYSICAL PROPERTIES
STRUCTURE
motifs/domains
zinc finger motif of C2H2 Kruppel type
conjugated MetalloP
HOMOLOGY
Homologene
FAMILY Kruppel family of C2H2-type zinc finger proteins
CATEGORY regulatory , transcription factor
SUBCELLULAR LOCALIZATION     intracellular
intracellular,nucleus,chromatin/chromosome
basic FUNCTION involved in transcriptional regulation
CELLULAR PROCESS nucleotide, transcription, regulation
PHYSIOLOGICAL PROCESS
PATHWAY
metabolism
signaling
a component
INTERACTION
DNA binding
RNA
small molecule metal binding,
Zn2+
protein
cell & other
REGULATION
ASSOCIATED DISORDERS
ANIMAL & CELL MODELS