Selected-GenAtlas references | SOURCE | GeneCards | NCBI Gene | Swiss-Prot | Orphanet | Ensembl |
HGNC | UniGene | Nucleotide | OMIM | UCSC |
Home Page |
FLASH GENE |
Symbol | SS18 | contributors: mct/npt - updated : 11-10-2021 |
HGNC name | synovial sarcoma translocation, chromosome 18 |
HGNC id | 11340 |
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Corresponding disease |
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Location | 18q11.2 Physical location : 23.596.218 - 23.670.611 | ||
Synonym name | |||
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Synonym symbol(s) | SYT, SSXT, MGC116875, SYT-SSX1, SYT-SSX2, SS18-SSX1, SMARCL1 |
DNA |
TYPE | functioning gene |
STRUCTURE | 74.39 kb 11 Exon(s) |
10 Kb 5' upstream gene genomic sequence study |
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MAPPING | cloned | Y | linked | N | status | confirmed |
RNA |
TRANSCRIPTS | type | messenger |
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EXPRESSION |
Type | ubiquitous |
constitutive of |
expressed in | (based on citations) | ||||||||||||||||||||||||||||||||||||||||
organ(s) |
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cell lineage
cell lines
| fluid/secretion
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at STAGE |
PROTEIN |
PHYSICAL PROPERTIES
STRUCTURE
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motifs/domains
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HOMOLOGY |
interspecies | ortholog to murine Ss18 |
intraspecies | homolog to SS18L2 |
Homologene |
FAMILY |
CATEGORY | regulatory , transcription factor |
SUBCELLULAR LOCALIZATION | intracellular |
intracellular,nucleus,nucleoplasm,nuclear bodies,nuclear speckles | |
text | colocalized and binding with BRM in discrete nuclear speeckles |
basic FUNCTION | |
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CELLULAR PROCESS | nucleotide, transcription, regulation |
PHYSIOLOGICAL PROCESS |
PATHWAY |
metabolism |
signaling |
a component |
INTERACTION |
DNA |
RNA |
small molecule |
protein | |
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cell & other |
REGULATION |
Other | regulated by the SYT/SSX gene form the normal allele |
ASSOCIATED DISORDERS |
corresponding disease(s) | BSSX |
Other morbid association(s) |
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Susceptibility |
Variant & Polymorphism
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Candidate gene
Marker
| Therapy target
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ANIMAL & CELL MODELS |