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FLASH GENE
Symbol ALKBH6 contributors: npt - updated : 24-03-2010
HGNC name alkB, alkylation repair homolog 6 (E. coli)
HGNC id 28243
Location 19q13.12      Physical location : 36.500.021 - 36.505.141
Synonym symbol(s) MGC15677, ABH6
EC.number 3.4.22.17
DNA
TYPE functioning gene
STRUCTURE 5.12 kb     7 Exon(s)
MAPPING cloned Y linked N status provisional
RNA
TRANSCRIPTS type messenger
identificationnb exonstypebpproduct
ProteinkDaAAspecific expressionYearPubmed
7 splicing 956 17 161 - Strausberg (2002)
  • using an alternate splice site in the 3' coding region compared to variant 1, resulting in a frameshift
  • 7 splicing 980 - 266 - Strausberg (2002)
    EXPRESSION
    Type widely
    constitutive of
       expressed in (based on citations)
    organ(s)
    SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
    Lymphoid/Immunethymus   predominantly
    Nervousnervecranial nerve  highly
    Visualeye   moderately
    tissue
    SystemTissueTissue level 1Tissue level 2LevelPubmedSpeciesStageRna symbol
    Connectivebone  highly
    cell lineage
    cell lines
    fluid/secretion
    at STAGE
    PROTEIN
    PHYSICAL PROPERTIES
    STRUCTURE
    motifs/domains
    HOMOLOGY
    interspecies homolog to murine Alkbh6
    Homologene
    FAMILY
  • ALKB family
  • CATEGORY enzyme , DNA associated
    SUBCELLULAR LOCALIZATION     intracellular
    intracellular,nucleus
    basic FUNCTION unknown
    CELLULAR PROCESS nucleotide, repair
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS