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FLASH GENE
Symbol VPS13D contributors: np - updated : 27-09-2004
HGNC name vacuolar protein sorting 13D (yeast)
HGNC id 23595
Location 1p36.21      Physical location : 12.290.112 - 12.572.096
Synonym name
  • vacuolar protein sorting-associated protein 13D
  • related to C elegans, cosmid C25H3, >100kDa
  • Synonym symbol(s) FLJ10619, KIAA0453, FLJ23066
    DNA
    TYPE functioning gene
    STRUCTURE 282.00 kb     70 Exon(s)
    text structure translation start codon is in exon 2
    MAPPING cloned Y linked N status provisional
    RNA
    TRANSCRIPTS type messenger
    identificationnb exonstypebpproduct
    ProteinkDaAAspecific expressionYearPubmed
    - - 14634 - 4388 ubiquitous Velayos-Baeza
    - - 14559 - 4363 widely but not in brain and testis Velayos-Baeza
    EXPRESSION
    Type
    constitutive of
       expressed in (based on citations)
    organ(s)
    SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
    Cardiovascularheart    
    Digestiveintestinelarge intestinecolon  
    Nervousbrain    
    Respiratorylung    
    Urinarykidney    
    tissue
    SystemTissueTissue level 1Tissue level 2LevelPubmedSpeciesStageRna symbol
    Connectivebone   
    Muscularstriatum   
    Nervousperipherous   
    cell lineage
    cell lines
    fluid/secretion
    at STAGE
    physiological period embryo
    Text stem cells
    PROTEIN
    PHYSICAL PROPERTIES
    STRUCTURE
    motifs/domains
  • a UBA motif
  • a ricin-B lectin domain
  • HOMOLOGY
    Homologene
    FAMILY
  • VPS13 family
  • CATEGORY unknown/unspecified
    SUBCELLULAR LOCALIZATION     intracellular
    intracellular,cytoplasm
    basic FUNCTION unknown
    CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein
    cell & other
    REGULATION
    ASSOCIATED DISORDERS
    ANIMAL & CELL MODELS