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FLASH GENE
Symbol GNLY contributors: mct/npt - updated : 31-03-2009
HGNC name granulysin
HGNC id 4414
DNA
TYPE functioning gene
STRUCTURE 4.46 kb     5 Exon(s)
10 Kb 5' upstream gene genomic sequence study
MAPPING cloned Y linked N status provisional
Map pter - D2S2371 - GNLY - D2S2232 - D2S388 - qter
Authors Gene Map (98)
RNA
TRANSCRIPTS type messenger
identificationnb exonstypebpproduct
ProteinkDaAAspecific expressionYearPubmed
5 splicing 751 15 145 - Jongstra, Deng, Chung (2008)
  • secreted extracellularly by NK cells and cytotoxic lymphocytes via a nongranule exocytotic pathway, and its concentrations are elevated after T cell activatio (Chung 2008)
  • 6 splicing 995 - 129 - Jongstra, Deng, Chung (2008)
  • includes an additional 242 bp segment
  • - - - 9 - - Chung (2008)
  • released into the granule via a calcium-dependent pathway into the intercellular space between effector and target cells
  • EXPRESSION
    Type widely
       expressed in (based on citations)
    organ(s)
    SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
    Digestivestomach   highly
    Endocrineparathyroid   highly
    Lymphoid/Immunespleen   highly
    cells
    SystemCellPubmedSpeciesStageRna symbol
    Blood/HematopoieticNK cell
    Lymphoid/Immunelymphocyte
    cell lineage
    cell lines
    fluid/secretion
    at STAGE
    physiological period pregnancy
    Text placenta
    PROTEIN
    PHYSICAL PROPERTIES
    STRUCTURE
    motifs/domains
    HOMOLOGY
    Homologene
    FAMILY saposin-like protein (SAPLIP) family
    CATEGORY immunity/defense
    SUBCELLULAR LOCALIZATION extracellular
        intracellular
    intracellular,cytoplasm,cytosolic,granule
    intracellular,nucleus
    text
  • in cytotoxic granules of cytotoxic T lymphocytes and natural killer cells
  • released into the granule via a calcium-dependent pathway into the intercellular space between effector and target cells (Chung 2008)
  • basic FUNCTION
  • involved in immunity against intracellular infection against M tuberculosis and other pathogens
  • having antimicrobial activity against M. tuberculosis and other organisms
  • exhibits cytolytic activity against a variety of intracellular microbes (Latinovic-Golic 2007)
  • cationic cytolytic protein released primarily by CTLs and NK cells, chemoattractant and proinflammatory activator, having a crucial role in cellular immunity (Chung 2008)
  • CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein
    cell & other
    REGULATION
    Other regulation in response to IL2 or bacterial antigen stimulation occurs at several levels: RNA expression, extensive alternative splicing and posttranslational processing (Latinovic-Golic 2007)
    ASSOCIATED DISORDERS
    corresponding disease(s)
    Other morbid association(s)
    TypeGene ModificationChromosome rearrangementProtein expressionProtein Function
    constitutional     --over  
    in the skin lesions of subjects with Stevens-Johnson syndrome (SJS) and toxic epidermal necrolysis
    constitutional     --over  
    in peripheral blood cells of patients with primary biliary cirrhosis (Qian 2008)
    Susceptibility
    Variant & Polymorphism
    Candidate gene
    Marker
    Therapy target could be used as a specific therapeutic target to develop a more effective therapy for Stevens-Johnson -toxic epidermal necrolysis
    ANIMAL & CELL MODELS