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FLASH GENE
Symbol CMTM3 contributors: mct - updated : 11-07-2019
HGNC name CKLF-like MARVEL transmembrane domain containing 3
HGNC id 19174
DNA
TYPE functioning gene
SPECIAL FEATURE component of a cluster
STRUCTURE 9.90 kb     6 Exon(s)
MAPPING cloned Y linked N status provisional
RNA
TRANSCRIPTS type messenger
identificationnb exonstypebpproduct
ProteinkDaAAspecific expressionYearPubmed
6 splicing 2439 19.7 182 leukocytes,placenta,testis 2017 28428220
encoding the same isoform that variants 1,2 and 3
5 splicing 1901 19.7 182 - 2017 28428220
  • differring in the 5' UTR
  • encoding the same isoform that variants 1,2 and 3
  • - splicing 2035 19.7 182 - 2017 28428220
  • differring in the 5' UTR
  • encoding the same isoform that variants 1,2 and 3
  • - splicing initiation site 1813 10.1 96 - 2017 28428220
    differring in the 5' UTR and the 5' coding region
    6 - 2333 - 182 - 2017 28428220
    6 - 2366 - 182 - 2017 28428220
    EXPRESSION
    Type ubiquitous
       expressed in (based on citations)
    organ(s)
    SystemOrgan level 1Organ level 2Organ level 3Organ level 4LevelPubmedSpeciesStageRna symbol
    Reproductivemale systemtestis  predominantly Homo sapiens
     male systemmale genital tract  predominantly Homo sapiens
    cells
    SystemCellPubmedSpeciesStageRna symbol
    Blood/Hematopoieticleukocyte
    cell lineage
    cell lines
    fluid/secretion
    at STAGE
    physiological period pregnancy
    Text placenta
    PROTEIN
    PHYSICAL PROPERTIES
    STRUCTURE
    motifs/domains
  • four transmembrane domains which are included in a central MARVEL domain
  • one leucine zipper and two LXXLL motifs
  • HOMOLOGY
    interspecies ortholog to murine Cklfsf3
    intraspecies homolog to CKLFSF5
    Homologene
    FAMILY chemokine-like factor gene superfamily
    CATEGORY chaperone/stress , signaling
    SUBCELLULAR LOCALIZATION extracellular
        intracellular
    intracellular,cytoplasm
    intracellular,nuclear envelope
    text
  • expressed ubiquitously except for plasma cells
  • novel secretory protein released via exosomes
  • basic FUNCTION
  • scaffolding for signaling proteins such as BASH, Btk, and ERK at the ER and nuclear membrane and facilitating ERK activation by signaling from cell-surface receptors
  • may play some roles in the maturation and maintenance of the male reproduction
  • play important roles in the immune system and participate in tumorigenesis
  • may play an integral role in the development and progression of prostate cancer
  • regulates migration and invasion of gastric cancer cells
  • is a tumor suppressor gene, plays an important role in the suppression of cell growth and apoptosis
  • new regulatory function for CMTM3 in angiogenesis
  • CMTM3 mediates cell-cell adhesion at adherens junctions and contributes to the control of vascular sprouting
  • CELLULAR PROCESS
    PHYSIOLOGICAL PROCESS
    PATHWAY
    metabolism
    signaling
    a component
    INTERACTION
    DNA
    RNA
    small molecule
    protein
  • colocalizing with BLNK
  • repressing KLKL3
  • CMTM3 is involved in CDH5 turnover and is a regulator of the cell surface pool of CDH5
  • cell & other
    REGULATION
    ASSOCIATED DISORDERS
    corresponding disease(s)
    Other morbid association(s)
    TypeGene ModificationChromosome rearrangementProtein expressionProtein Function
    tumoral     --low  
    significantly methylated in Colorectal cancer tissues when compared with adjacent normal colorectal tissues
    tumoral     --low  
    in gastric and testicular cancer
    tumoral     --low  
    in esophageal squamous cell carcinoma (ESCC) patients
    tumoral     --low  
    significantly elevated promoter methylation of CMTM3 in laryngeal squamous cell carcinoma tissues compared with their adjacent tissues
    tumoral     --low  
    due to promoter hypermethylation contributed to the proliferation and migration of oral squamous cell carcinoma cells
    tumoral     --low  
    dramatically downregulated in primary gastric cancer tissues
    Susceptibility
    Variant & Polymorphism
    Candidate gene
  • is a candidate marker for prognosis of gastric cancer in the clinic
  • Marker
  • with SSTR2, and MDFI having a potential role as biomarkers for colorectal cancer
  • CMTM3 protein expression in resected esophageal tumors may present an effective prognostic biomarker 5)
  • elevated CMTM3 methylation is a risk factor in male laryngeal squamous cell carcinoma patients, especially in the patients with age over 55 years and with smoking behavior
  • secreted CMTM3 in urine is likely a diagnostic marker for prostate cancer
  • is an independent prognostic factor for the evaluation of the survival of oral squamous cell carcinoma patients
  • Therapy target
    SystemTypeDisorderPubmed
    cancerurinary 
    CMTM3 may be a potentially target for therapeutic strategy in clear cell renal cell carcinoma (PMID: 23907292)
    ANIMAL & CELL MODELS