Selected-GenAtlas references | SOURCE | GeneCards | NCBI Gene | Swiss-Prot | Ensembl |
HGNC | UniGene | Nucleotide | OMIM | UCSC |
Home Page |
FLASH GENE |
Symbol | SNX6 | contributors: mct - updated : 13-06-2013 |
HGNC name | sorting nexin 6 |
HGNC id | 14970 |
|
Location | 14q13.1 Physical location : 35.030.617 - 35.099.366 |
Synonym name | TRAF4 associated factor 2 |
Synonym symbol(s) | TFAF2, MGC3157, MSTP010 |
DNA |
TYPE | functioning gene |
STRUCTURE | 68.45 kb 15 Exon(s) |
10 Kb 5' upstream gene genomic sequence study |
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MAPPING | cloned | Y | linked | N | status | confirmed |
RNA |
TRANSCRIPTS | type | messenger |
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EXPRESSION |
Type | widely |
expressed in | (based on citations) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
organ(s) |
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tissue |
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cell lineage
cell lines
| fluid/secretion
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at STAGE |
PROTEIN |
PHYSICAL PROPERTIES
STRUCTURE
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motifs/domains
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mono polymer | homomer , heteromer , polymer |
HOMOLOGY |
interspecies | homolog to C.elegans Y59A8B.22 |
homolog to rattus Snx6 (99.51 pc) | |
homolog to murine Snx6 (99.51 pc) |
intraspecies | homolog to SNX5 |
Homologene |
FAMILY |
CATEGORY | transport carrier |
SUBCELLULAR LOCALIZATION | plasma membrane |
intracellular | |
intracellular,cytoplasm,organelle,membrane | |
intracellular,cytoplasm,organelle,endosome | |
intracellular,cytoplasm,cytosolic,granule | |
intracellular,nucleus | |
text | colocalised with SNX1 and SNX5 on early endosomes |
basic FUNCTION | |
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CELLULAR PROCESS |
PHYSIOLOGICAL PROCESS | cellular trafficking transport |
text | receptor trafficking |
PATHWAY |
metabolism |
signaling |
a component | component of the retromer |
INTERACTION |
DNA |
RNA |
small molecule |
protein | |
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cell & other |
REGULATION |
ASSOCIATED DISORDERS |
ANIMAL & CELL MODELS |