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GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (3860 bp)
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PERCEVAL Exon Candidates (2 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       1437       2130   2   Terminal    694    88        Good
cggcaagtgctggcggcggctgctcgcgcaagtcagctggcgtgggaactaccctttgta
gctgagaacggcttgtttattgctacaaagactctattgacattggtagcttcagcggca
gcagcttcttacggtataaagctgttgcttcctgaagaggctacaagcatccttccctag
GACTGCTGTAAGCTTTGAGCCTCTAGCAGGAGACATGCCTCGGGGACGAAAGAGTCGGCG
CCGCCGTAATGCGAGAGCCGCAGAAGAGAACCGCAACAATCGCAAAATCCAGGCCTCAGA
GGCCTCCGAGACCCCTATGGCCGCCTCTGTGGTAGCGAGCACCCCCGAAGACGACCTGAG
CGGCCCCGAGGAAGACCCGAGCACTCCAGAGGAGGCCTCTACCACCCCTGAAGAAGCCTC
GAGCACTGCCCAAGCACAAAAGCCTTCAGTGCCCCGGAGCAATTTTCAGGGCACCAAGAA
AAGTCTCCTGATGTCTATATTAGCGCTCATCTTCATCATGGGCAACAGCGCCAAGGAAGC
TCTGGTCTGGAAAGTGCTGGGGAAGTTAGGAATGCAGCCTGGACGTCAGCACAGCATCTT
TGGAGATCCGAAGAAGATCGTCACAGAAGAGTTTGTGCGCAGAGGGTACCTGATTTATAA
ACCGGTGCCCCGTAGCAGTCCGGTGGAGTATGAGTTCTTCTGGGGGCCCCGAGCACACGT
GGAATCGAGCAAACTGAAAGTCATGCATTTTGTGGCAAGGGTTCGTAACCGATGCTCTAA
AGACTGGCCTTGTAATTATGACTGGGATTCGGACGATGATGCAGAGGTTGAGGCTATCCT
CAATTCAGGTGCTAGGGGTTATTCCGCCCCTTAA
gtagatctgaggcagacccttgggggtgtaaaagagagtcacaggtaccccaaggagtag
atgccagggtcctaagttgaaaatgatgtcgattgggggcgggggacactgtatttgata
tttgtgatcagtgatcattgttcaactgcgaaatagagtgtttgcttttgataatggaaa

Exon  2 +       3249       3355   0    Initial    107    55    Marginal
gaagtagaaaatacacaaaaatcatcttgagaggaggagggcagagagaaggggtggttg
caggggaaaaggttgtcatggggtacttcagaaataaaaaaagatgagaccgtcagaaaa
tcttggtgaggggacaatctgaggtttggaaataatagagaagaaggggagggagtaaaa
ATGGAGGCACTGAAGGTAGCGTGGACATTTGGAAATAAACTCTTCACCGAACTGTTAAGG
TTATATGAAGGGGAAAGTGGAGAACAAGGAATGAGGCAAGGGAAGAA
gtgagcggggcagaccctcaaagggtgggtgttgtggctgactttaaactaatgacaata
aaaatggttaataataacaaccctgaaataattcgagaaaaggctataaaaaagcagaac
ttctgagatactggatgagccagagaaaaggctccacctgtggcatctccgaaaggtaac

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