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GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (5000 bp)
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PERCEVAL Exon Candidates (2 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       1197       1280   0   Internal     84    54    Marginal
gccagtcatcctctgcccagcttttctggtcccaagcttgtagccagctcctccagagag
gtttcacccagtcacggaaactctgtggcctgaggtttagggaggtctggtagaggtaac
tccctggaagaggctgctgctgagaactgcctgaaactcccacttcctctgtgactgcag
GTTTCCAACCACAAGCACCAAAGCAGAGGGGCAGGCAGCACACCACCCAGCAGCCAGAGC
ACCAGCCCAGCCATGGTCCTTGAG
gtaagtgctgctgcccagccaggccaggccagaattcgaagtggaaaacccggggcatca
ggggaatgccagggctggcccacagcccagggtcaccacagggttgggtgagtagctgga
ggccgcatgggttgtggcagaaacagcactggggaattgggaacccagcttggccactga

Exon  2 +       2259       3316   0   Internal   1058    85        Good
cactatcccagagcccaggctgagcggatggagttgaggaagtacggccctggaagactg
gcggggacagttataggaggagctgctcagagtaaatcacagactaaatcagactcaatc
acaaaagagttcctgccaggcctttacacagccccttcctccccgttcccgccctcacag
GTGAGTGACCACCAAGTGCTAAATGACGCCGAGGTTGCCGCCCTCCTGGAGAACTTCAGC
TCTTCCTATGACTATGGAGAAAACGAGAGTGACTCGTGCTGTACCTCCCCGCCCTGCCCA
CAGGACTTCAGCCTGAACTTCGACCGGGCCTTCCTGCCAGCCCTCTACAGCCTCCTCTTT
CTGCTGGGGCTGCTGGGCAACGGCGCGGTGGCAGCCGTGCTGCTGAGCCGGCGGACAGCC
CTGAGCAGCACCGACACCTTCCTGCTCCACCTAGCTGTAGCAGACACGCTGCTGGTGCTG
ACACTGCCGCTCTGGGCAGTGGACGCTGCCGTCCAGTGGGTCTTTGGCTCTGGCCTCTGC
AAAGTGGCAGGTGCCCTCTTCAACATCAACTTCTACGCAGGAGCCCTCCTGCTGGCCTGC
ATCAGCTTTGACCGCTACCTGAACATAGTTCATGCCACCCAGCTCTACCGCCGGGGGCCC
CCGGCCCGCGTGACCCTCACCTGCCTGGCTGTCTGGGGGCTCTGCCTGCTTTTCGCCCTC
CCAGACTTCATCTTCCTGTCGGCCCACCACGACGAGCGCCTCAACGCCACCCACTGCCAA
TACAACTTCCCACAGGTGGGCCGCACGGCTCTGCGGGTGCTGCAGCTGGTGGCTGGCTTT
CTGCTGCCCCTGCTGGTCATGGCCTACTGCTATGCCCACATCCTGGCCGTGCTGCTGGTT
TCCAGGGGCCAGCGGCGCCTGCGGGCCATGCGGCTGGTGGTGGTGGTCGTGGTGGCCTTT
GCCCTCTGCTGGACCCCCTATCACCTGGTGGTGCTGGTGGACATCCTCATGGACCTGGGC
GCTTTGGCCCGCAACTGTGGCCGAGAAAGCAGGGTAGACGTGGCCAAGTCGGTCACCTCA
GGCCTGGGCTACATGCACTGCTGCCTCAACCCGCTGCTCTATGCCTTTGTAGGGGTCAAG
TTCCGGGAGCGGATGTGGATGCTGCTCTTGCGCCTGGGCTGCCCCAACCAGAGAGGGCTC
CAGAGGCAGCCATCGTCTTCCCGCCGGGATTCATCCTG
gtctgagacctcagaggcctcctactcgggcttgtgaggccggaatccgggctccccttt
cgcccacagtctgacttccccgcattccaggctcctccctccctctgccggctctggctc
tccccaatatcctcgctcccgggactcactggcagccccagcaccaccaggtctcccggg

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