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GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (15162 bp)
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PERCEVAL Exon Candidates (4 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       1791       1905   2   Internal    115    78        Good
ttccctcggccccacccagaccgacgccaagggcagctgtggagtggggcgcggcaatgc
gccccttaacagccctccaggtgattctgccgcgcagaggaggaaagaatgggagaaggg
aaggggagagggaggcggcttctttgcgactaattggacacctgcccttccccttcccag
GCTTCTTAGCCCGGGCTTGGACAGCCGCCTTCCGGCCAGAGGGGATGAGGTTGCGCTGCG
CTCCGGGAGCGCCGATGGCGTGACTGGCCCCGCGCGGAGCAGCGACAGTAAGGCT
gtgtggggggagctgggacctaagccgcgcgcacacccctttctctgcgtctggtggagg
tgcacagaggcttttgagtcaggcccaagcgcagccaggtgacctccccgcggcctttca
agcctgagctcggtggacagctccctctcccgtgagtcccgctgtcctgtacgcgcccgg

Exon  2 +       2714       2894   0   Internal    181    83        Good
gaccttcagaccccagctggaggggaagcagagctgcaggctgttgcttcatacggtagg
tgttcccaaaagaggggaggaagatggtgtccgggaactttctggtcccaacggagggct
atggatttctcccgtcggccctcagggtgatgaggggcctctattttcaaccccgctcag
ATTTGCTTGGGGGAGAAAGCCAAAGAGGAGATGCATCGCGTGGAGATCCTGCCCCCAGCA
AACCAGGAGGACAAGAAGATGCAGCCGGTCACCATTGCCTCACTCCAGGCCTCAGTCCTC
CCCATGGTGCGCATTTCCCTGCTGGCTGGAAGACTGCTGTCAGCCTCACCCTCACCCTTG
G
gtggggatggacacacacgagggtgcattcaccctacagaaatgagccatgctagggagg
tagcacagcccatgcagaaagccggggtccagcccagctcaccccttcctagagctgtgt
gaccttgggccagttaagctgtctgcaaaaattacactttaaaccaggggtccccaactg

Exon  3 +      11176      11342   1   Internal    167    99   Excellent
gttgggagggccagaaagggtgccgccctgtacaggtggcaggcaggtaaccactgtcaa
ctccaggctaggattcctccagggcagtgcttggagcaacacggatcacagaatgggagg
tgggcattgattctgtagctctgaagctgtgcccctgcatcctttcccatgctattacag
AAGCATCAGACCTAACCTGGGAGGAGGAGGAGGAAGAAGAAGGGGAGGAGGAGGAAGAGG
AAGAGGAAGATGATGAGGATGAGGATGCAGATATATCTCTGGAGGAGCAAAGCCCTGTCA
AACAAGTCAAAAGGCTGGTGCCCCAGAAGCAGGCGAGCGTGGCTAAG
gtgggggaaggagcgtggctgtttggaaggaagtggtacccctacagaagcacttaagag
gggtgggccaccgggagcctgggccagcctcccagaatgagtgtacaggatgggccaagg
ccacctcagctagttctggccaggagctcagcggggaccttgtggactttgggaatctgt

Exon  4 +      11577      11611   0   Internal     35    96   Excellent
taagaggggtgggccaccgggagcctgggccagcctcccagaatgagtgtacaggatggg
ccaaggccacctcagctagttctggccaggagctcagcggggaccttgtggactttggga
atctgttctggctctggactttgtctgaactctcataatacactgttttttggttcccag
AAAAAAAAGCTGGAAAAAGAAGAAGAGGAAATAAG
gtaactctttctacctattaaattagccaaagtctccagctgagatatacagtgttagaa
agaatactgtgctgttgggatgtacgtgtacaaatgtacacacggtgtgtctacctgcac
tcgcaggcacatgggtatggaagtgctgaagggtggcatcacctttctggaagagcatta

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