GENSCAN 1.0	Date run: 16-Jan-104	Time: 23:10:04

Sequence DNAJB6_1 : 82701 bp : 48.25% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    158    153    6                               1.05
 1.02 Term -   1264    570  695  2  2   53   49   413 0.482  27.63
 1.01 Init -  12802  12766   37  1  1   63   92    43 0.683   2.37
 1.00 Prom -  20290  20251   40                              -3.46

 2.01 Init +  22756  22820   65  0  2   75   88    11 0.566   0.42
agcaggctagtggttagctctagtggaagttccctctgtaggccagtaggtgctaaggtg
acaccaccccttcctccctctccagacccatcccaccaccgtgatttgcccatccccagc
agcctcatcactgaccacctgtttttacttgcaggacccattccaacaatctcgtaaaac
ATGGTGGATTACTATGAAGTTCTAGGCGTGCAGAGACATGCCTCACCCGAGGATATTAAA
AAGGC
gtaagtagttttatttctgtggtaatgcattttcacagtggtacattggtaattgagtag
tataacttcttctattgcctatgaaaatggcttttaatgtagtataccagtctttgaatg
ccacatagtttaatttgacagagcagttaacgagcatttgcagtctaggcctgggctttg

 2.02 Intr +  27344  27453  110  2  2   58  101    95 0.938   7.73
ctggattttagaactttgtgtatttcattgtagaggaaagggaggttttacagttaaaac
cagtattcatctcaccagttggcagctctgaagccattctcgtggttaatgatgttagtt
tcaaaagcatagttgatttctggatttagaatgtgatctatatcctttattctttccaag
ATATCGGAAACTGGCACTGAAGTGGCATCCAGATAAAAATCCTGAGAATAAAGAAGAAGC
AGAGAGAAAATTCAAGCAAGTAGCGGAGGCATATGAAGTGCTGTCGGATG
gtgagtgacagcgagctgctgaaggaccctgagcgggcatgccggaatgcggagtgggtg
ttgggatcctcctcagggtagcacagtatggactcaagtgacttgtttttgatgcctact
ggattttgggcccttctaagagatttttacttttctcgtgaagatttgaattgatttagg

 2.03 Intr +  30686  30745   60  0  0   70  107    96 0.994   8.41
gagagaggtacagaaagttttccctgttgctttgttttgttttaaagaaaaggtggccat
actccttgaaattcagttgtaaaacatcgaaaactgatttacaactggggaaatacctta
tctattgaattaagggtttaaaaggaacttggccttaccgacttttctttcaatttttag
CTAAGAAACGGGACATCTATGACAAATATGGCAAAGAAGGATTAAATGGTGGAGGAGGAG

gtaagtacgtgagttttttctttgaagacaaaaggtcttggcaagtaagttgagtttgta
aatcacgagtctcttggtcagagtcgattttgtatcagtaaatagagatgcaacgtagaa
agcgaactaaattggggagaggacagagaaattgatggcatttaaaagtcttttacgaga

 2.04 Intr +  31557  31667  111  1  0   73  111    68 0.994   7.95
ctgggcacactcactctctgtcagtacagggctcatgttttgaattatagagaacttcag
gtttatgaaatatttttgtttttattagttcatgatttgtataatgttttgtcaacaaag
aattctttgcctacaaagcaccaaaattcataaactaaaagctgtgttgtatttgtgcag
GTGGAAGTCATTTTGACAGTCCATTTGAATTTGGCTTCACATTCCGTAACCCAGATGATG
TCTTCAGGGAATTTTTTGGTGGAAGGGACCCATTTTCATTTGACTTCTTTG
gtaagttaatcacgtgggttgacttggtgtgtgtccatgacccaaatgagggcttactta
gtatggcctttctgttgaattaacattgtattttaggctgggcgcggtggctcatgcctg
taatcccagcactttgggagcctgaggcgggcagatcacctgaggttgggagttcaagac

 2.05 Intr +  34948  35052  105  2  0   97   92    40 0.974   5.49
taattagatgtgagtgaataagtgagtttttacccctagtccaaggagagaggtgctagt
cttactgaagcgctttactgttaaatgctccattttacatgcagacctattttaagacca
ggtaccctgtgtttcccatgattagtgtggcagtgatacttgttcattccgttcttatag
GTGTTCTAGATGACTTCCATTTTCAGGCTCTCAGGATTTACACACTGGGGAAGCTGCTGC
TCCATGGCTGCTATATGTATGTAGTCACTGAGCAGCCTGCTGACG
gtatgtttaatgtagatgggtgtggatgcagagccagagggatttccgcttattcatgat
gtagttcaggggtcaacaccctggtctgtggcctgttacgaactggcctgttgggaacag
gaggtgagcggcgcgcaggcaggcaagcattactgcctgagccccacctcctatcagctc

 2.06 Intr +  36331  36618  288  2  0   56   33   451 0.032  33.62
ctttgtaaagcatcactgtggtacgaatgatgctctgtagcaatagaggaggagtcctgt
ggtatgtagaaccaaggaaagcagacttcttgcaggaaaaatgagtgcattgaggatagt
aacctgactttctgacctgtgattaaattatgatagtagtcagtcattttactctcccag
GGTTTGAGGAAGTGGCCGGTGAGGACTTGGAGCCTAGTGAGGAGTTAGTAGAGCTGCCCA
GGGTGGAGGAGGCCACAGAGGACAGCCCTGGTGAAGAGAACAGTGAGGCCTTGGATGTGT
TGATATCCAGCAAGGACCTGGCACTGTCTAGTGAGGACGAGGCCTGCACAGGATGTAACT
GGGGCCTGGGCGAGCCCTTCAGCGAGGAGCTGGGGCTCATATCCAGCGAGGACGGGGCCA
GCCCTGGGGACGTAGAGGAGCTCAGCGAGGAGTGCGAGGAGCCGCTGA
gtgaggaggagcacagcgggccagagctggggcgctgccggcaccaccataaagtgtcaa
ggagctgcccgagtgggactgacttaaaacagtgtatctagaataaaatggtttcctcta
gtgccttgatactgtccttggtcagacgacctcagctgccttggagatagaactgaagaa

 2.07 Intr +  49686  49787  102  1  0   80   91    66 0.046   6.25
cggtatttgagacacaatttattttgtcaggttaattctattttaggaaaggaagatgtg
ttgttgacaggttggcttcagccatgtttttacagcctgaaaattacttatattcatggt
gtatttcagtaatgtccttaaacaacttagttaccctcacacatgcattttctttaccag
AAAGGTTTTTAAATGAATTTTTTTCCTACAGAATTGTCGAGAACGGTCAAGAAAGAGTAG
AAGTTGAAGAAGATGGCCAGTTAAAGTCCTTAACAATAAATG
gtaaggagcagctgctgcgcttggataacaagtaattcaacgcacgcacttaacagaaat
gttaaactataacaagcaccatttgaggattaacaggaacatttttttgaagatttcaaa
cgaactcgactttcagtataattgtacctaaagtatttataaacagctcatcggagcctc

 2.08 Intr +  54114  54256  143  1  2    8   69   108 0.135   0.97
tagacgtcactgatttccagagacagcagagtttatgattgggcgttagaaggcctgtcc
tggcttctgtgctttggtcagtatttgctgccttttgtgcagggtatcagtcggtcttac
ctaactgttcactaaggactcgactctgagctttgtggcctgggcaagttgcacactcag
GGCAGACCCCTGACTGCGCTTTGCCCTTTTCCCTGTACCCTGATTGGGAGAAGATTCCTG
CCTCGGAGTGCAACCCCAACAGGAATGCAGGTCCTGTGAAGGCAGTAATTCTCGTCTGTC
TGGCTGCTGCTGTGTCCTGGCAG
gtgtgccctggaagcatcccgtgagtgctggctgcggaaacccagatggtggttgctgtc
ccacagcccttgattcagagatgccctggaccacagctgcctggagtgtagagcagaggc
ttactccccacacccctcctgctgtgcgacctgcggcccagcctgctgttggaggcttgc

 2.09 Intr +  54642  54864  223  2  1  128   45    83 0.705   5.70
ttggctttacaaagattctccactcctgggagccctgactagcaaacgtctgtgtagtgt
tgatgccacactgcagttgttaacatcgcgtccttttctgccctgttaggttggtttctc
tcttaaacagggcagcgctgtcatcccattcccccgcctggtccttcctcttccccctag
CTGGTTACTGAACTGACTGCCATTCAGGCACTGATGGGAAATCACTTCCAGAACTTGCAA
AACCATAGAGACCGGAGGTTTTCTGAAGGAGGCTTTGGTGCTGAAACATTGCTGCTGAAA
CATTGTTGCAGAAATGTGGGGTGGAGCCTCCTTCCTGCCCGTCTCACCCAGGGGATGTGG
TTTGCTTCCCGTGTGGTCAGCGCTGTGCTGCGAGCTCTGAGAG
gtgaccttttcctctgccttcccacagctgccctgagttggcaaaaagtgctttgcccaa
ggacagggtctaattgataatggcgtgtgggggagatgtggctcctgaggcctggagcat
gcattcattcattcctttatattattttatattttacttaacttttggaccagttctctc

 2.10 Intr +  61177  61406  230  2  2   60   37   129 0.113   2.59
gaggaacttcagacagttcaagtctaaggggtttttcaggcataaacatccaccgcccgc
ctccttttctacatgggaaggccgacgccacagtgtgctttagttggtttccatctgaaa
ggggtcctgaacctgccacgggacgtgatgccagtggtagctgaatgtgcctcactccag
GTCCTCCTGGAATTATCCTCACCACTCGGCTGAGGGATGCTGTCCACACCCCTCTCACCG
ATGTGGACGTGTGCACGCGGTGTGTGTGCAGAATCCAGGCTATCAGGATGCTGTGCCGTG
GCTGCCCCTGCGAGGCCCGTGTGAAGCCAGCCCCGTGCGTCTGTAGCTACCCCTTGAGGA
GTAACCCGAGCGGCGTGCTTCCTGGGAAGTTGCTAAGCTGCGCTGAGGTG
gtaacaacagcatgtggcctccacctcacgtaagcatttggtgtctccttgaacctctgt
tgtgcaccagcacctaggagacactgaagagccagacccagtcacggccgcccagccagg
gagagggggtgcgggtgaatggtgtcctgcaggtgctgggccggaacctctgtgtcgctg

 2.11 Intr +  64493  64662  170  1  2   64   82   122 0.352   7.94
tgccttttttcggtttctttgtgagctgcagtaacgggaaagcaagttctagggaagtgt
gagcatgaggtgctgggatgcctgggtccccgcgcctttgtgtatgtgctcgtgtctagg
gagttctgaacatgggggatgcccgggtccccgcgccttcgtgtacgcacttgtacgtag
GGAGGTCTGAGCATGGGGGATGCCTGGGTCCCCGCGCCTTCATGGACACGCTCGTGTGTG
GTGTGCCGTGATGCTTGCTGTGCAGCAGGCCGGCTGGTGGAGAGCTTTCGCTGGCACCGA
GCTCTTCTCCTTGGTGTGGCCGTCGGCTCCATCCTGGTCATCCTTCCCTG
gtaggtgttactctaaagctgggtcctaaacctggcaggagcttctaatgagaaggggca
cttgatcctcgggtgggctgtgtttacgttcttggctctggaattacctttgtcttgcgg
tctccgccgctggtggtctatgtctcatcaccaggctcaccgccggggctcttgcgtccg

 2.12 Term +  65302  65377   76  1  1  105   34    43 0.546  -2.09
aaaaggtttgatgacctctttctgtcttaaaaggggaggtgaggtaaaaccactcctgag
agggacttacccgctgtggtccgtgctttgccgaagccccgggttttgatggtgccggca
gctgtcggcctcctcgcctctgatttctctggcccaccacgagcccctcacctcctgcag
GGCTTACTGTGACCTGGGCTCCTCCTCCTGTATCAAAGGATTGCTGGCAGTCAGAGCTCT
TCAGTCGTGTACATGA
tttatataatttatatttcttttttctttttttttgagaaggagtctcactctgttgcct
agcctggagtgcgatggcgccatcttggttcaccgctacctccacctcctgggttcaagc
aactctgcctcagcctcccgagtagctgggattacaggcacgcgccaccacaccccgcta

 3.02 PlyA -  67131  67126    6                               1.05
 3.01 Sngl -  70248  69871  378  0  0   64   32   246 0.849  12.55
 3.00 Prom -  70628  70589   40                              -7.46

 4.01 Init +  73462  73714  253  0  1   98   44   218 0.828  13.90
tcctcagcgttcaaaacattttttccatatttcttttttttaatgcatggccttccaatg
actttttctgtatttcaaagattaataaaagcacaacttttcagagcgttgagaagccgg
cccgtcttgggtgtgtgtgttgtgcggggccagagctggagctgcactggagtggccggg
ATGGCCCTGCCTTGGGCGGGGCTGTGGCTCCCGTGGGCGCCGCCGCTGCTGCCACAGATT
TATTCCAGCACGAGGCGGAGAGGGGATGTCTTCCGTGTATGGACTCAGGAGGAAATCGCC
AACTGGACCCAGAACCTTTCTTCCCCAGGGTGGCTCAGCTGGCTGGTTTTGACAGCGAAC
TTGTCAGCCCTGACCGTGATTTCAGTGGGGCACACTCACTCTCGGAAGAGGCGTGTTGAC
TGTGCCAAAGCTG
gtggggcggggagccgcttcttccaggagagagagaggggtgattttctgatgactcact
tttttcccactcttggaggattaagttctggccccagtggcgccactgaagaaaggagat
aacctctttctcctgcccggagatggcgcgtctggattcagggagatcgtgcggccagct

 4.02 Intr +  73970  74176  207  0  0  127   69   145 0.830  15.55
gaggattaagttctggccccagtggcgccactgaagaaaggagataacctctttctcctg
cccggagatggcgcgtctggattcagggagatcgtgcggccagcttccctccctctgctc
tggatgggggccggccgccgccgctcactcacggctctctctctcccgctgtgcctgcag
GTGTGGCCGACGACGATGCCCTCGCTGAGGAGCGCATGCGGAGAGGCCAGAACGCCCTGC
CAGCCCAGCCTGCCGGCCTCCGCCCGCCGAAGCCGCCCCGGCCTGCCTCGCTGCTGAGAC
ACGCGCCTCACTGTCTCTCTGAGGAGGAGGGCGAGCAGGACCGACCTCGGGCACCCGGGC
CCTGGGACCCCCTCGCGTCCGCAGCAG
gtgtgcaaagggaggcagccgtggagcaggcgcagagtgagacttctctgggtgccagag
gacagcgaggacacaaaccgcgcctgggctgctgtgttctgacctgagcgggcgtgggcg
gtcgggcggggcgggaggaggtagcctcgctctgctcctctcccgctcgcggcgccccac

 4.03 Term +  74415  74512   98  1  2   66   54    75 0.844   0.03
aggacagcgaggacacaaaccgcgcctgggctgctgtgttctgacctgagcgggcgtggg
cggtcgggcggggcgggaggaggtagcctcgctctgctcctctcccgctcgcggcgcccc
acgccacggtggctccgggccccccaccgttaaaacggggtccgcgtgtcctgtacgcag
CGTGTTGCTCCGCAAAGGATGACAGAGCTGCCACGGCAGTGCGAGGTGCTGCTTTTACCG
TAGACGTGCCTTTTCGTAGCTTTCAGCGTAGAGCTTGA
ggcctgtggcttaggccgggtggtctcgtgctggtggggtctgcgtttgcccctgcccct
ccgtcagcttcaccttctcgtgccttcttctgcgctgggtgcagaacaaaagaccccctc
aagtcaagcctccttgtgaagcgtagtctgcccgcccaccccccgtggggttcttggccg

 5.03 PlyA -  77388  77383    6                              -0.45
 5.02 Term -  78827  78438  390  2  0   66   42   272 0.992  15.39
 5.01 Intr -  82430  82361   70  1  1   87   96    47 0.825   4.58

Predicted peptide sequence(s):


>DNAJB6_1|GENSCAN_predicted_peptide_1|243_aa
MTGRQGYEDAPNAPGLLALVVAAAPRAFLSLLSPTTNRKCVTRRRHGGVNFRPTLTPRMR
SFHCPYRGPNLGGARPTFAKVLGSSAAPKSPGDWGRGGGEAQGEGAELGAGSTVPGSPDA
RKAQRRPRRFQMALIVGPEGAHSGNREVVAPFIFLLTGGPRSASAAVLRGSAVELGGSAY
SGTKAGGGRARAEKSPKEKKNKPSGGQRRRRRRRPPLVNLGKPGYPKFPGERERVETSPG
NSD

>DNAJB6_1|GENSCAN_predicted_peptide_2|560_aa
MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFGVLDD
FHFQALRIYTLGKLLLHGCYMYVVTEQPADGFEEVAGEDLEPSEELVELPRVEEATEDSP
GEENSEALDVLISSKDLALSSEDEACTGCNWGLGEPFSEELGLISSEDGASPGDVEELSE
ECEEPLKRFLNEFFSYRIVENGQERVEVEEDGQLKSLTINGQTPDCALPFSLYPDWEKIP
ASECNPNRNAGPVKAVILVCLAAAVSWQLVTELTAIQALMGNHFQNLQNHRDRRFSEGGF
GAETLLLKHCCRNVGWSLLPARLTQGMWFASRVVSAVLRALRGPPGIILTTRLRDAVHTP
LTDVDVCTRCVCRIQAIRMLCRGCPCEARVKPAPCVCSYPLRSNPSGVLPGKLLSCAEVG
GLSMGDAWVPAPSWTRSCVVCRDACCAAGRLVESFRWHRALLLGVAVGSILVILPWAYCD
LGSSSCIKGLLAVRALQSCT

>DNAJB6_1|GENSCAN_predicted_peptide_3|125_aa
MVLSVQSQGSGRPPAAAALATRPALLEALFTSLPGEAITSKVLTCTVDGAFPPHCLLQLS
SKKNEKEKVAGEQSQQAGWTDRLQENRNKHHPMALASDSASRSLPGPALSILPPGHNGIS
PEVRV

>DNAJB6_1|GENSCAN_predicted_peptide_4|185_aa
MALPWAGLWLPWAPPLLPQIYSSTRRRGDVFRVWTQEEIANWTQNLSSPGWLSWLVLTAN
LSALTVISVGHTHSRKRRVDCAKAGVADDDALAEERMRRGQNALPAQPAGLRPPKPPRPA
SLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAACCSAKDDRAATAVRGAAFTVDVPFRS
FQRRA

>DNAJB6_1|GENSCAN_predicted_peptide_5|153_aa
XKAGRQDVSTERVSGPVLVASRARLSTREGQACRSSPHPTHNHTTPHSPVTRAQWKLPPS
SPEERVLTALQEQHEMRVQNRQAFHAAYLGNVPQATVTERKNEQREACVPLAAAEAAEYL
LPKQGGGSAENAEERKREEARRSPSRGACGEPP