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GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (4333 bp)
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PERCEVAL Exon Candidates (3 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       1422       1542   0   Internal    121    88        Good
ggtgaatgacatttgtgggtaggttatttctagaagttaggtgggcagcttggaaggcag
atgcacttctacagactattccttggggccacacgtaggttcttgaatcccgaatggaaa
ggggagattgataactggtgtgtttatgttcttacaagtcttctgccttttaaaatccag
TCCCAGGACATCAAAGCTCTGCAGAAAGAACTCGAGCAATTTGCCAAGCTCCTGAAGCAG
AAGAGGATCACCCTGGGATATACACAGGCCGATGTGGGGCTCACCCTGGGGGTTCTATTT
G
gtgggttcccctctgcagattctgaccgcatctcccctctaaggagtatccctgaaccta
gtggggaggggcaggggcagactctaccctcacccatgaagaggagtagggagagggaga
agatgcttgggctttgagctccctctgggaagaggtggtaagcttggatctcagggtcac

Exon  2 +       1776       1912   1   Internal    137   100   Excellent
gaacctagtggggaggggcaggggcagactctaccctcacccatgaagaggagtagggag
agggagaagatgcttgggctttgagctccctctgggaagaggtggtaagcttggatctca
gggtcacaagggccctgcgtgctccctcattttgcttctcttttgactggcctcccccag
GGAAGGTATTCAGCCAAACGACCATCTGCCGCTTTGAGGCTCTGCAGCTTAGCTTCAAGA
ACATGTGTAAGCTGCGGCCCTTGCTGCAGAAGTGGGTGGAGGAAGCTGACAACAATGAAA
ATCTTCAGGAGGTAAGG
gtgggagggggatacccggggaccttccctttcttggcctaatttccattgcttccatca
ctggctcgtagctctccgtctttggtgcagtggttctcagtgggatggagtgaaattcct
cagttctgctgggataaggtccagagccaacccttccaggatcctgccttttcacaccac

Exon  3 +       2191       2412   0   Terminal    222   100   Excellent
agtgggatggagtgaaattcctcagttctgctgggataaggtccagagccaacccttcca
ggatcctgccttttcacaccaccacctggctctgctgacacatctagtcacagacccctg
tgatgctgttactcagcaagtccaaagcttgcccttgtcacccccttcccacctgcacag
ATATGCAAAGCAGAAACCTTCGTGCAGGCCCGAAAGAGAAAGCGAACCAGTATCGAGAAC
CGAGTGAGAGGCAACCTGGAGAATTTGTTCCTGCAGTGCCCGAAACCCACACTGCAGCAG
ATCAGCCACATCGCCCAGCAGCTTGGGCTCGAGAAGGATGTGAGTGCCATGTCTCTCTGC
GGGCTCCATCTCTTTCCCCTGTCACCACCTCGCTTTCCCTAG
ctctggctcctccaactgctctagggctgttggctttggacagaatgtccaagcagtcag
gcctgtctcagctcattctctaatgtcctcctctaactgctctagggctgttggctttgg
atagaatgtccaagcagagtcaggcccgtctctcagctcattgtctaatgtcattctcct

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