GENSCAN 1.0	Date run: 16-Jan-104	Time: 16:54:14

Sequence TPD52L1_1 : 112120 bp : 38.97% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -   1037   1032    6                               1.05
 1.05 Term -   1582   1074  509  2  2   75   42   224 0.074  10.08
 1.04 Intr -   1757   1661   97  2  1   59   42    68 0.041  -2.04
 1.03 Intr -   2788   2388  401  2  2   48   45   181 0.002   3.10
 1.02 Intr -  18450  18286  165  1  0    9   71   113 0.099   0.71
 1.01 Init -  26566  26488   79  1  1   63   63   110 0.336   7.27
 1.00 Prom -  32756  32717   40                              -4.35

 2.03 PlyA -  33803  33798    6                               1.05
 2.02 Term -  38793  38626  168  0  0   59   41   155 0.668   4.80
 2.01 Init -  40341  40219  123  0  0   73  109    40 0.540   4.82
 2.00 Prom -  53772  53733   40                              -6.15

 3.02 PlyA -  54352  54347    6                               1.05
 3.01 Sngl -  56976  56731  246  0  0   42   54   221 0.459   8.93
 3.00 Prom -  58788  58749   40                              -6.05

 4.01 Init +  59898  59952   55  2  1   89   28    63 0.132   1.90
ccctttgcttggttacacagttggacttatttaattttctaatacagtgcaagattattt
tactattcaaaagcgattctgcaacttttacatatttgccaacaatgcaggatatggcta
ctgatccaaaatcatagtttgtaatcattttaactcccggtcctctgtattgtttcaatc
ATGGCCATGAAGCCACCACCTACTCCACAGGAGAGCTTGCCAGCATGCGCTGGAA
gtgtgtggatgccaatgagtgatttcattgcaaggttgaaggaggcactttaatctaaag
ctgatctcttgattcatacttgccaagattttgcctacattcttcagatggcttaagaca
gggaagggcataagctttggtgccagactagctttagttaaagcccagcaacttgggact

 4.02 Intr +  60993  61043   51  1  0   77   97    58 0.138   3.56
ctcttcaggtagctgggaacatgatgtcccctggtgctgaagttttttgcagatactact
catgatcttgtctccctcagctgagtttcagttcagtagcccctccgagctgattcagct
ttgccttggctctcattggagggagattctttccacttcctccatttgtcctctggccag
GGCTGGTAACCCCAGCCCCTGATGCAGGAGCACCAACTTCTTGCCAAGTTG
gtgagtttctccctaagaaccatgagaagttctgaatcctatccatggttaactgactgc
agaagagtgagttggagaattaaacacgaggggcctctctgtccaacacccctggacctg
ccaaggttacagtgatgtggctgtgtaccaggttggtgtgggatagcctgaaggatattc

 4.03 Intr +  61864  61892   29  2  2   74  123    10 0.125   0.02
ggtagaggagggtagagagtgggtctgaaggagtgaacagaatctccagcagattcttct
ctaagtgtaacccatttcatactttctgggccaatgcccagagagaaaggtgggacatac
acatctcagggcttagctctcctcattctctcctcctttcctcttcccacaatctaccag
GGATAGAGCCAGAGGCACATACCTCCTCG
gtaagtcctagatatctaaggggtatctaaggggaactgcttgggctggatgtcctgggc
ttggcttttgctatgccaagagagaaataatgatatgtagaacattgcctcaaaaaaaac
ttttttctgcatatctcttttcttgctggtaaatccaatttcaaatgccaaaatcctaaa

 4.04 Intr +  66811  66928  118  0  1   57   42   103 0.147   1.72
ccctggagaacacaggcatttgagtcagccagatgttgaggggccctaccagggaacttc
tttatattttaaataagaagtcatttatctcacataacaagttagaagctattctgggtt
aacccaaggcacaatgatggcatcaagaaccccggctcttcccatattttcctctgccag
AGTCAGTTTGTCAGTGATGATTCCTCACAGCTCCAACTGCTTCGAGCCACATCTGCAGTG
GAAAAAAGGCTTCATATTTTAAATTCTAACCTCAAGGTTGTTGTGGACGACCCAGGTG
gtgtgcattcaagttgcaagctgctttcccatgcagtcccactcagggtcacgagttctc
aggggaggatttttttctctgtccattcagtcctgagtttcaagatgggcaacttgcctt
tcagatccctgtgtaaagaatgaaggtatttatttctagttcacctgactctcagggtgc

 4.05 Intr +  67507  67622  116  2  2   58   91   159 0.258  12.45
tattctttgctttcttggagctcgtcacacatttaggaggatttttgtcttttctggaat
ttttagttgttttttggtgggagggtctgtcagtgcatctagtcctccacactatggaag
cagaagttggtttaaattcactttaaaaattgccttctgttttatcaattctgcctaaag
GTTTGTTGGAGACTGAACCGTTGCAAGGAACAGACGAAGATGCAGTAGCCAGTGCTGACT
TCTCTAGCATGCTCTCTGAGGAGGAAAAGGAAGAGTTAAAAGCAGAGTTAGTTCAG
gtatgtttagtaatcttattgttgctatttctatctctggatcttaagagttattattag
tttgatataataattgtaatgatgttgtattgtaatgatgttgtctttcatttaataaaa
tttataaatgaatacattacaagatgattcatttttccagggtatttttctactgttaca

 4.06 Intr +  76547  76695  149  1  2   95   85   116 0.102  10.11
aattctgtttctactttgagatattagactatcatctgtatggggtgtatttggcaaacc
tacacatgggattgtataaataggagggtcagaggctgctttggaatacccagagcttct
gtaagtatccttttttgctggtctgacattttcccccaccatttcccctccgccttgtag
CTAGAAGACGAAATTACAACACTACGACAAGTTTTGTCAGCGAAAGAAAGGCATCTAGTT
GAGATAAAACAAAAACTCGGCATGAACCTGATGAATGAATTAAAACAGAACTTCAGCAAA
AGCTGGCATGACATGCAGACTACCACTGC
gtaagtatcatatgaacagtgttttattaactcagcctgatgtctcctcactctgttgtg
ttttgtttcatttttcctacaaggctgatttggtgcatgaagctaggaaaaaaaaatact
ttctctaaaagcaaagcaaagaaatgtgaataatcattaagtatgctgcatgtgaagcag

 4.07 Intr +  95711  95812  102  2  0   95   69   108 0.865   7.97
cttctgatgaacagcagccaacccatcatccccagacaatgaatggaaacagtggttttg
tggatcttcttcctaaatctgttgaggaaaggacattttcaaagtaaggagtgagaagga
agatgaattgtttatgggagatcatgatataaaaaccatgttgttctgttttatttctag
CTACAAGAAAACACATGAAACCCTGAGTCACGCAGGGCAAAAGGCAACTGCAGCTTTCAG
CAACGTTGGAACGGCCATCAGCAAGAAGTTCGGAGACATGAG
gtactgtgggaaaataccatgggaacggcgctaagcccttggctttccgattgaagggag
cactagctattagctgctcatctcaacatatgtatttttttattttaatggataaaaatg
ttatatggctgatatgattgatgactaagataaattttcacactgggacattttctgcct

 4.08 Intr + 104527 104587   61  1  1  124   87    40 0.782   5.32
tttctgaacctaacctaacagaagtgacatacattttaaaacgtggttggtgcaggtggc
aagctgacaggtagctctgtggcagaggccgtgtttacagatatgagcagaaaaccaaac
agcatggttgctaagacagctaggcctttggagctgacctctctctttttgttattttag
GAATTCTCCTACTTTCAAATCATTTGAGGAGAGGGTTGAGACAACTGTCACAAGCCTCAA
G
gtacagatgaagtgaattctgtgtgagtgggtccattgactcaggacagcttagccattg
ctgcggttagtttaaagtcgaggcagggccaagaaggcaggcttgcatcaagtcagacct
tttctttcacatataaatctatgaataaaaccactattgaatagtgttactatatcctta

 4.09 Term + 110263 110391  129  0  0   71   41   174 0.910   8.20
caagtatgaataatattctagcactctactaaaggaaacaaacttctgtgcattcttttg
tctctaaagatagaaagtatttctgaatttgaaagtaatccagcttttggtattcttata
aaaacattacaaaaatgatagtaacaactaactgcatttttgtggatctgctcatttcag
ACGAAAGTAGGCGGTACGAACCCTAATGGAGGCAGTTTTGAGGAGGTCCTCAGCTCCACG
GCCCATGCCAGTGCCCAGAGCTTGGCAGGAGGCTCCCGGCGGACCAAGGAGGAGGAGCTG
CAGTGCTAA
gtccagccagcgtgcagctgcatccagaaaccggccactacccagcccatctctgcctgt
gcttatccagataagaagaccaaaatcccgctgggaaaaacccaggccttgacattgtta
ttcaaatggcccctccagaaagtttaatgatttccatttgtatttgtgttgatgatggac

Predicted peptide sequence(s):


>TPD52L1_1|GENSCAN_predicted_peptide_1|416_aa
MPRIQPDMSVKTEWSEESEGLQGCVKASPWSSLGMRNTHSGSIVYPRKAHGCLVTLSGLF
GKGILESQIPEHGLEEEAQVIGSKDSSLTGMGLAKASNEDSLNNSNMQVRLESSGAAPTS
FSSGVKASNLTSAFEFDQLPSPLVELSFPIYIIEEKIWEAAALRAGLRRMEQTSKVRAVQ
TIVILAANLLGDSRPTQSPTHSHSGRSAPRGRAHQGKGAKHAFRTRHNRSFGQPRGWEGQ
GRLAAEEDPQQILSLGSRHYTKGAGGSGVLDVQHGTNLFCPRAKLGGAGKEPLCAPQDLT
LGAIGDHSPCACASMVADFELRAAGTPWCFPEQMAAAPRLRTQLAPPLAPTPGTRVASAA
RRGLGTQAAATSRFWLPPPLPVHLAQTKLEQARRWAPPAGALYSRRKAPTPGAIRA

>TPD52L1_1|GENSCAN_predicted_peptide_2|96_aa
MEDMDANQSFQEIRWDICDRSSCHWALSTRYMCKSGADVRQKRKSCPLSQKHIKQVDNER
HTGANAKGQFVLLQNHSAGNWAKSITENKESVAGTK

>TPD52L1_1|GENSCAN_predicted_peptide_3|81_aa
MWPFNSLPGNILYMHREKFRDAGSTTRARDPSGTIVNIPGETNQEFPGGEGTGLVSRSLL
KLGIDLMTVGLSLSYVRLPLP

>TPD52L1_1|GENSCAN_predicted_peptide_4|269_aa
MAMKPPPTPQESLPACAGRLVTPAPDAGAPTSCQVGIEPEAHTSSSQFVSDDSSQLQLLR
ATSAVEKRLHILNSNLKVVVDDPGGLLETEPLQGTDEDAVASADFSSMLSEEEKEELKAE
LVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDMQTTTAYKKTHET
LSHAGQKATAAFSNVGTAISKKFGDMRNSPTFKSFEERVETTVTSLKTKVGGTNPNGGSF
EEVLSSTAHASAQSLAGGSRRTKEEELQC