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GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (16959 bp)
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PERCEVAL Exon Candidates (3 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       6612       6672   0   Internal     61    70        Good
gcctgatgctcagccccctccccacaggtacaaatgcagtgagtgtcagactggctggtt
ctgggctcccagacccgccaagcagcaaatacagtgttgcgcgtgttctggggattttga
tatcctgctgattcagtattctaggactctctgtgccctggctccctcccttcctcacag
ACCTGGGCCAGGGACCCCATCAATGAAGGTACCCTAGGGACCCTTAAGTTCAACTTGATA
G
gtggggaggagtagagattcctttccaccccagggtttccttttggggactggtttgtaa
taaactcctacaagtgaaatccattcaactataagaaaactaaaaatgaaaccactttta
agacgggggatggcatgtaacactgaactggagtgaagagcacttgaactctgagccttc

Exon  2 +       8251       8439   0    Initial    189    52    Marginal
aggcagctcagaaaattgttttcctttgtcagccacataaattcagcagaggctcttgga
gggtccctgctggtgaggggtgaggccagcagtggaactctgatttggtttttgctgagc
tggtggttgaaaggaatcctactacatcggggttataatagggaagatacattttagaat
ATGCCCAGTGGAGCCATCGGATGCTGCATCGTCCCCAGAGAGCCAAGTCATCGTGGGCCA
AGCTCCCATCCCCATGTCTGGCCTCAACTGCAGGCCCAGATGTTGACAGCTGCCTCTGGA
GGGTTATGGGAGCCTGTGAATGCCAACATCCCCATTGCCTGCAGCGGCTGCTCCCATCCT
GGCTTCCTG
gtgggacttttccatgaattggggaatctgctttctgattccaaggcctattaaaatttc
tgagcattgcccatttcttttgctttatctgtaggacatgggctgtttttaaagaacctc
acaaatgaaaaaaaaaaaaaaaagtgaatctgcttaaggaaagggagtcttttactttct

Exon  3 +      11646      11993   0   Terminal    348    87        Good
tcaccaagggctgtgcgcatccagcccaaggtggtccactgccagccgctggacctcaag
ggcccggcggtcccacccgagctggacaagcacttcttgctgtgcgaggcctgtgggaag
tgtaaatgcaaggagtgtgcatccccccggacgttgccttcctgctgggtctgcaaccag
GAGTGCCTGTGCTCAGCCCAGACTCTGGTCAACTATGGCACGTGCATGTGTTTGGTGCAG
GGCATCTTCTACCACTGCACGAATGAGGACGATGAGGGCTCCTGCGCTGACCACCCCTGC
TCCTGCTCCCGCTCCAACTGCTGCGCCCGCTGGTCCTTCATGGGTGCTCTCTCCGTGGTG
CTGCCCTGCCTGCTCTGCTACCTGCCTGCCACCGGCTGCGTGAAGCTGGCCCAGCGTGGC
TACGACCGTCTGCGCCGCCCTGGTTGCCGCTGCAAGCACACGAACAGCGTCATCTGCAAA
GCAGCCAGCGGGGATGCCAAGACCAGCAGGCCCGACAAGCCTTTCTGA
cagtttgtgtcgaagccccagtgctctgcctggaaacctggttctcttctgacatctaag
aagactgcagcaaggtcagaggttttagcctcctgaggctgaccttgctagtctgcccac
tccctacccccagcttcggaaaatacagagaccaccaccacgtaccctgtattccccaag

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