GENSCAN 1.0	Date run: 16-Jan-104	Time: 09:52:16

Sequence DKK2_1 : 116893 bp : 36.38% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 Term -    358    110  249  1  0   54   44   277 0.008  14.62
 1.03 Intr -   2045   1864  182  0  2    4   27   240 0.274   8.17
 1.02 Intr -   3056   2816  241  2  1   59   24   171 0.360   4.00
 1.01 Init -   3334   3170  165  1  0   81   92   225 0.817  19.95
 1.00 Prom -  19453  19414   40                              -4.15

 2.01 Init +  45095  45144   50  1  2   79   72    61 0.410   4.07
tgtctttgttatagccagcacaacccatatttattttcatatacaatccctatcttcatt
cacaactgtcaacatctcacagagcacaaattgaggatggctgctccagaccttcaataa
cagcctgaatccaaaagcaaactttcaatggccaagaggtgggaagaggggcagccaggc
ATGAAGAAGTGTTCCTATTCCAGAGACCACACTGGAGAAGATGGACTTGG
gtgagaaaagctggattccacacgttaatcagaaagttgttggccagtgcagaaacagtt
gtagaaaaatttggtacttaatcacagtccagcacttagtaaacctaaacctttagcatt
tctactccatcctaatgaacatctttcatctaataatatggtgactccggggcttagggc

 2.02 Intr +  59449  59616  168  1  0   32   71   112 0.094   2.04
agtgggtccctgagccccgtgcctcctgatggggagatacctcccagcaggggtcgacag
gcacctcatacaggagagctctgactggcacctggagattgcccctctagaatgaagctt
ccaaaggaaggaacaggcagcaatctttgctgttctgcagcctctgctggtgatatccag
GCAAACAGGGTCTGGAGTGGACCTCCAACAAACTCCAGCAGACCTGCAGCAGAGAGGCCT
GACTGTTAGAAGGAAAACTAACAAAAAGAAAGGAATAGCATCAACATCAACAAAAAGGAC
AGCCACACAAAAACCCCATCTGAAGGTCACCAACATCAAAGACCAAAG
gtagataaatccatgatgatgaggaaaacccagcgcaaaaaggcagaaaattccaaaaac
cagagcgcctcttctcctccaaaggatcacaattcctcccaacaagggaacaaaactgga
cggagaatgagtttgacgaattgacagaagtaggcttcggaaggtgggtaataacaaact

 2.03 Intr +  60136  60350  215  1  2   -8   53   144 0.237  -1.26
tatcaatagctgaatcaatcaagtggaagaaaggttatcagagattgaacatcaaagtaa
tgaaataaagcatgaagacaagaatagagaaaaaagaatgaaaaggaaagaacaaagcct
ccaagaaatatgagactatgtgaaaagaccaaacctacatttgattggtgtacctgaaag
TAACGGGGAGAATGGAACCAAGTTGGAAAACACTCTTCAGGTTGTTATCCAGGAGAACTA
TCCCAACCTAGCAAGACAGGCCAACATTCAAATTCGGGAAATACAGAGAACACCACAAAG
ATACTACTCGAGAAGAGCAACCCCACGACACATAATTGTCAGATTCACCAGGATTGAAAT
GAAGGAAAAAATGTTAAGGGCAGCTAGAGAGAAAG
gttgggttacccacaaagggaagcccaacagactaacagcagatctctctgcagaaaccc
tacaagccagaagagagtgggggccaatattcaacattcttaaataaaagaatttttaac
ccacaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatccttac

 2.04 Term +  61177  61775  599  2  2   16   48   332 0.773  15.70
gaaggccattacataatggtaaagggatcaattcaacaagaagagctaactatcctaaat
atatatgcaccaaatacaggagcacccagattcataaagcaagttcttagagatctacaa
agagacttaggctctgacacaataatagtgggagatttaacaccccactgtcaatattag
ACAGATCGACGAGTCAGAAAATTAACAAAGATATTCAGGACTTGAACTCAGCTTTAGACC
AAGTGGACTTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTCT
TCTCAGCACCACATCACACTTATTCCAAATTTAACCGCATAATTGGAAGTAAAACACTGC
TCAGCAAATGGAAAAGAATGGAAATCATAACGAACAGGCTCTCAGACCACAGTGCAATCA
AATTAGAACTCAGGATTAAGAAACTCACTCAAAACCGCACAACTACATGGAAACTGAACA
ACCTGCTCCTGAATGACTACTGGGTAAATAACAAAATTAAGGCAGAAATAAATAAGTTCT
TTGAAACCAATGAGAACAAAGATGCAACATACCAGAATCTCTGGGACACAGCTAAAGCAG
TGTTTAGAAGGAAATTTATAGCACTAAATGCCCACAGGAAAAGGCAGAAAAGATCTAAAA
TCAGCACCCTAATATTACAATTAAAAGAATTAGAGAAGCAAGAGCAAACAAAGTCAAAAG
CTAGCAGAAGACAAGAAATAACTAAGATTCGAGTGGAACTGAAGGAGATAGAGACATGA
aaaatccttccaaaaattaatgaatctaggagctgctttttctttaagattaacaaaata
gacagactgctagccagactaataaagaaggaaagagagaagaatcaaacagacataata
aaaaatgataaaggggatgtcaccgctgatcccacacaaatacaaactaccatcagagaa

 3.01 Sngl +  62070  63542 1473  2  0   16   42   437 0.785  27.18
ataataaaaaatgataaaggggatgtcaccgctgatcccacacaaatacaaactaccatc
agagaatactttaacacctctaggcaaataaactagaaaatttaaaagaaatggataaat
tcctagacacatacaccctcccaaactaaaccaggaagagtcgaatccctgaatagatga
ATGACAAGTTCTGAAATTGAGGCAGTATTTAATAGCCTAGCAACCAAAAAAATCCCAGGA
TCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAAGAGGAGCTGGTACAATTCCTT
CTGAAACTACTCCAAATAATACAAAAACAGGAAATCCTCACTAACTCATTTTATGAGGCC
AGCATCATCCTGATACCAAAACCTGGCAGAGACACAACCAAAAAAGATAATTTCAGACCA
ATGTCCCTGATGAACATCAGTGCGAAAATCTTAAATAAAATACTGGCAAACCAAATCCAG
CAGCACATCAAAAAGCTTATCCACCACAATCAAGGTGGCTTCATCCCTGGGATGCAAGTC
TGGTTCAACATACTCAAATCAACAAATGTAACCCATCGCATAAACAGAACCAATGACAAA
AACAACATGATTATCTCAATAAATGCAGGAAAGGCCTTCAATAAAATTCAACACCCCTTT
ATACTAAAAGCTGTCAATAAACTAGTTATTGATGGAACGTATCTCAAAATAATAAGAGCT
ATTTATGACAGATCCACAGCCAATAACATATTGAATGGGCAAGAGCTGGAAGCATTCCCT
TTGAAAACCGGCACAAGAAAAGGATGCCTTCTCTCACCACTCCTAGTCAACATAGTATTG
AAAGTTCAGGCCAGGGCAATCAGGCAAGAGAAAGAAATAAAACGTATTCAAATAGGAAGA
GAGGAAGTCAAATTGTCTCTGTTTGCAGATGACATGATTGTATATTTAGAACACCCCATT
GTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTGCAGCAAAGTCTCAGGATACAAA
ATCAATGTGCGAAAATCACAAGCATTCCTATACACCAATAACAAACAAATAGAGAGCCAA
ATCATGAGTGAACTCCCATTCACAATTGCCATGAAGAGAATAAAATACCTAGGAATACAA
CTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTGAAGGAAATA
AGAGAGGACATAAACAAATGGAAAAACATTCCATGCTCATGGATAGGAAGAATCAATATC
GTGAAAATGGCCATACTGCCCAAAGTAATTTGTAGATTCAATGCTGTCCCCATCAAGCTA
CCATTGACTTTCTTCACAGAATTAGAAAAAAACTACCTTAATTTCATATGGACCCAAAAA
AGAGCCCATATAGCCAAGACAATCCTAAGCAAAAAGAAGAAAACTGGAGGCATCATGCTA
CCTGACTTCAGACTATACCTCAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAA
ATCAGGTATATAGACCAATGGAACATAACAGAGGCCTCAGAAATAACACCACACATCTAT
GACAATGACCATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGAAAAGGATTCC
CTATTTAATAAATGGTGTTGGGAAACTGGCTAG
ccatatgcagaaaactgaaaccggaccccttccttacaccttatacaaaaattaactcaa
gatggattaaagagttaaatgtaagagctaaaacaataaaaaaccttagaggaaaaccta
ggcaataccattcaggacataggcaagggcaaagacttcatgactaaaataccaaaagca

 4.05 PlyA -  64307  64302    6                               1.05
 4.04 Term -  65756  65707   50  0  2  120   43    30 0.154  -1.81
 4.03 Intr -  81317  81168  150  0  0   19   86   119 0.076   4.01
 4.02 Intr -  98112  97961  152  2  2  -40   86   122 0.052  -1.91
 4.01 Init -  99595  98961  635  1  2   47   83   347 0.116  24.96
 4.00 Prom - 100076 100037   40                              -6.15

 5.02 PlyA - 100245 100240    6                               1.05
 5.01 Sngl - 101402 100473  930  2  0   71   43   685 0.875  58.48
 5.00 Prom - 111043 111004   40                              -2.15

 6.02 PlyA - 111132 111127    6                               1.05
 6.01 Sngl - 113526 113323  204  0  0   71   45   241 0.978  13.04

Predicted peptide sequence(s):


>DKK2_1|GENSCAN_predicted_peptide_1|278_aa
MARPSQPTFSRLAALWTGAAEDTESAQNSSISRFQGNSDLWGVGRCQGLTLVLCERASHN
WYRVCALVSVRVYLYNSLQVAFNLSVCMTETEAPAESSLSQKRLQCPAVSLAPTTLSLSS
HHFASFRVIYVQFCVSVSPPREDLMELSLARELPICELSTISTAASRSRQQDESLLRINA
AISRRGGPQEDAKPGGEIPDRNERGQGAFEILSSLASCLLAPVNYKRSHSCQPPGLSRSN
SLRPKVEGCSGNDWDALALGGASGSRSASHGIAAGDKR

>DKK2_1|GENSCAN_predicted_peptide_2|343_aa
MKKCSYSRDHTGEDGLGQTGSGVDLQQTPADLQQRGLTVRRKTNKKKGIASTSTKRTATQ
KPHLKVTNIKDQSNGENGTKLENTLQVVIQENYPNLARQANIQIREIQRTPQRYYSRRAT
PRHIIVRFTRIEMKEKMLRAAREKDRSTSQKINKDIQDLNSALDQVDLIDIYRTLHPKST
EYTFFSAPHHTYSKFNRIIGSKTLLSKWKRMEIITNRLSDHSAIKLELRIKKLTQNRTTT
WKLNNLLLNDYWVNNKIKAEINKFFETNENKDATYQNLWDTAKAVFRRKFIALNAHRKRQ
KRSKISTLILQLKELEKQEQTKSKASRRQEITKIRVELKEIET

>DKK2_1|GENSCAN_predicted_peptide_3|490_aa
MTSSEIEAVFNSLATKKIPGSDGFTAEFYQRYKEELVQFLLKLLQIIQKQEILTNSFYEA
SIILIPKPGRDTTKKDNFRPMSLMNISAKILNKILANQIQQHIKKLIHHNQGGFIPGMQV
WFNILKSTNVTHRINRTNDKNNMIISINAGKAFNKIQHPFILKAVNKLVIDGTYLKIIRA
IYDRSTANNILNGQELEAFPLKTGTRKGCLLSPLLVNIVLKVQARAIRQEKEIKRIQIGR
EEVKLSLFADDMIVYLEHPIVSAQNLLKLISNCSKVSGYKINVRKSQAFLYTNNKQIESQ
IMSELPFTIAMKRIKYLGIQLTRDVKDLFKENYKPLLKEIREDINKWKNIPCSWIGRINI
VKMAILPKVICRFNAVPIKLPLTFFTELEKNYLNFIWTQKRAHIAKTILSKKKKTGGIML
PDFRLYLKATVTKTAWYWYQIRYIDQWNITEASEITPHIYDNDHLIFDKPDKNKQWEKDS
LFNKWCWETG

>DKK2_1|GENSCAN_predicted_peptide_4|328_aa
MFFETNENKHTTYQNLWDAFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELEKQEQTH
SKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLARLIKKKREKNQID
AIKNDKGDITTDPTEIQTTIREYYKHLCANKLENLEEMDKFLDTYTLPRLNQEEVESLNR
PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRNPTYKGCEGTRQGELQITAQGNKRGYKQ
MEEHSMLMGRKNQYHENGHTAQGIQLTRDVKDPFKENYKPLLNEIKGYKQMEEHSMLMGR
KNQYHENGHTAQDALAANQQKPLKDLIL

>DKK2_1|GENSCAN_predicted_peptide_5|309_aa
MEQSWMENDFDELREEGFRRSNYFELREDIQTKGKEVENFEKNLEECITRITNTEKCLKE
LMELKTKAQELREECRSLRSRCDQLEEKVSAMEDEMNEMKQEGKFREKRIKRNEQSLQEI
WDYVKRPNLHLTGVPERDGENGTKLENTLQDIIQENFPNLARQANIQIQEIQRMPQGYSS
RRATPRHIIVGFTKVEMNEKMLRAAREKGRVTHKGKPIRLTADLSAETLQARREWGPIFN
ILKEKNFQPRISYPAKLSFISEGEIKYFTDKQMLRDFVTTRPALKELLKEALNMERNNRY
QPLQNHAKM

>DKK2_1|GENSCAN_predicted_peptide_6|67_aa
MESGFGGVGGIFPYFARQALRTVATLENFQPMRTLLALFGTDFPLMEHWFADFGPEMTST
AKPFNAV