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GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (30244 bp)
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PERCEVAL Exon Candidates (7 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       1239       1285   0    Initial     47    63    Marginal
caaagccggaggcaaggccgcgcacgcgcaaacgcgggcgcgccgccgggccgtgctagt
gcgcggaagacgcatgcgctggcggcctgcgccgccttaagtgccgcgccagcccggggc
ggcccagtcggcctgtcagccggcttcgagataagtcccggcgcttgcgcggcggcggct
ATGGCGGCGGAGGAGGAGGAGGTGGACTCTGCCGACACCGGAGAGAG
gtaagcgcagccggcagggggcttcgtgtgtctccggcgcgcaccctccgcgcgggccgg
gttagggcccagcgggcagcaccaaggagtcgccgcccgcctggcgacgacgggcggctt
cctcgaccctccccggcatgagtccgcgcggcgcccagaggcgtcccggcgccgctctgc

Exon  2 +      12461      12833   1   Internal    373    84        Good
catggtcatttaggattatttacttcaataaaatgtgtactttttaaaaatagctgacaa
tacaagctaaaatcatgagattggatactagatgatttgtaatttttggttgctctgaga
atacttcccttctcagaagtaataaaatgaaacagaatttctcttttatgttttcattag
GTGTGCCTTGCACATACAAAAAAGAACCTGTTCGTATATCTAATGGAAATAAAATATGGA
CACTGAAGTTCTCTCATAATATTTCAAATAAGACTCCACTTGTCCTTCTCCATGGTTTTG
GAGGAGGTCTTGGGCTCTGGGCACTGAATTTTGGAGATCTTTGCACCAACAGACCTGTCT
ATGCTTTTGACCTATTGGGTTTTGGACGAAGTAGTAGACCCAGGTTTGACAGTGATGCAG
AAGAAGTGGAGAATCAGTTTGTGGAATCCATTGAAGAGTGGAGATGTGCCCTAGGATTGG
ACAAAATGATCTTGCTTGGGCACAACCTAGGTGGATTCTTGGCTGCTGCTTACTCGCTGA
AGTACCCATCAAG
gtaagtggtggtgacagaagagagggattataactgtgcttccaagtaccagactctagt
tcccatctttggtggttgttagtgtctgagccacaaggcagacattctcttaaaggaccc
tatagaccacaccacaactgatgaccaatatagtagctgaaataatcatgtcagatcttc

Exon  3 +      17217      17248   1   Terminal     32    88        Good
taatctttatttttttcttttaagtaaaatgacagctccttactttccgttttatgcatg
gagggaaaaaacacaaaaacaacgttgttttatttgttgggacttagtgttccaagccat
aactacttcagtccttgtcttttatgggcagctccattcttccattcgttacttttatag
GACAGTTTGAAGAGAAGAATGAAAAGGCCTAG
tttaatgcacttgtttaagaaggattcttactctaaagaacaaataaaagctgatcaatt
tttgccaacttttggattacaggcgtgagccactgcacctggcccggttttttcttttaa
ttttcctttccttctggcccctgctgctcagtaccccattaaaaaaactatctgtatttt

Exon  4 +      21955      22109   2   Internal    155    85        Good
tactgaatctcaaaagtttacacagaataagagcatgatacgatctatttagcactaatc
tttaacgtgaaggtttttgaaggtggttcattctacctttattttataaatcatgttagc
tctttatagtcttagggtgattttaccaaatgaacttaaatatattctttcccccaacag
GGTTAATCATCTCATTTTAGTGGAGCCTTGGGGTTTCCCTGAACGACCAGACCTTGCTGA
TCAAGACAGACCAATTCCAGTTTGGATCAGAGCCTTGGGAGCAGCATTGACTCCCTTTAA
CCCTTTAGCTGGCCTAAGGATTGCAGGACCCTTTG
gtgagtgcttatgttctaggaaagcaaaatgtttgtaagttatgagaagagcagaattca
ctattgttagtcaaaatcttaaaaacaaacaagaaaaccctgaacccttactttttctcc
tcttcctctaataagtaccatgtcttgcacaaagacgaatgcaactaggttcttctcctc

Exon  5 +      25193      25308   1   Terminal    116   100   Excellent
ttaggaggacagctatcagaatgtgtgctttttcccacctacaatatatatttgaataca
tatatatatgtgtgcatataacactcattacacagacaagcactaaaactttctatatta
tttagttgataagttaactataatttaaaacatgcattttttaaatttcctgttaaatag
GTTTAAGTCTAGTGCAGCGTTTAAGGCCTGATTTCAAACGAAAGTATTCTTCAATGTTCG
AAGACGATACTGTGACAGAATACATCTACCACTGTAATGTGCAGACTCCAAGGTGA
gggttaggattctcaattcactctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttt
gtgtgtgttttagactattttttttaaaactatttatttatttatttattcattcaatac
ggggtttcgctcttgtcacccaggctggagggcaatggtgcgatcttggctcaccacaac

Exon  6 +      27939      28103   0    Initial    165    86        Good
tgttccttacactgtctcataaattattttctatttaagctgaggtttttcttaggtgct
ggaaaagctaaatatgaatgtgttttgatagaagtgacagtgcaatgcatactcattccc
aaaaatcatacatcgtgattttctccttgccgttaaagtggtgagacagctttcaagaat
ATGACTATTCCTTATGGATGGGCAAAAAGGCCAATGCTCCAGCGAATTGGTAAAATGCAC
CCTGACATTCCAGTTTCAGTGATCTTTGGCGCCCGATCCTGCATAGATGGCAATTCTGGC
ACCAGCATCCAGTCCTTACGACCACATTCATATGTGAAGACAATA
gtaagtgtgtggcttgatttgggtttttaggtataggtgaggtccgttttattatctccc
ttaaaagaggttttaggtcatcctcgtgttgcaggtcatctgagccatacctgcagcctc
agtcggggacgtgataccacctgtgatgggtgcagggtttggcctgcacacatcttcatg

Exon  7 +      28689      28778   0   Terminal     90    93   Excellent
ctcagatccttttaatggatatacttaatagttactatagattattgttattttttaatc
acgtgttttatttaaatacagtggctctcacttttattactaagtgtctttgcttatata
tcattctgttttattaaatgcttttactcactaactgtctgaatgcttttccttatccag
GCTATTCTTGGGGCAGGACATTATGTATATGCAGATCAACCAGAAGAATTCAACCAGAAA
GTAAAGGAGATCTGCGACACTGTGGACTGA
acacactgaagctctgatgggaaaacctggtgactgatatagttgttcagcaataattca
tagtctgtgatgaagagtagtgaatacaacacacaaccaggcagccttcttgactatact
ttgcacatgttttctttaggaattcactcacacatttaaaccagttagtgccttctagaa

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