GENSCAN 1.0	Date run: 16-Jan-104	Time: 05:34:08

Sequence CASR_1 : 104082 bp : 40.99% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    263    258    6                               1.05
 1.03 Term -   2088   1976  113  1  2   89   49   104 0.016   4.34
 1.02 Intr -   7566   7463  104  2  2   81   26   102 0.013   2.20
 1.01 Init -  31499  31351  149  2  2   85   80    81 0.450   6.61
 1.00 Prom -  34098  34059   40                              -8.25

 2.01 Sngl +  40807  41010  204  0  0   61   47   173 0.762   5.44
aagaagttagaaatatcttaaattaacaacctaacatcacaccaagaagaactagaaaaa
caataggaaaccaaccccaaagctagcagaagaaagaaataaccaaagtcatagctgaac
ttgatgaaattgagatgcgaaaatccagacaaaagctggttcttcaaaaaattaagtgag
ATGGATAGGCCACTAGCTAGATTAATAAAGAAAAAAGAGAAGATCCAAATAAACACAATT
GGAAATGACAAAAGTGACATTACAACCAACCGCACAGACATACAAAAAATCCTTAGCGAA
TATTATCAAAACCTCTATGCACACAAACTAGAAAACCTAGAAGAAATGGATAAAATCCTG
GAAATCCAAGCCTCTCAAGATTGA
aacaggaaaaaattgaaaccttgaacagaccaataatgagctccaaaactgtatcagtaa
gaaaaagccaaccaaccaataaaagcccagagccagatggattcacagccaaattctacc
acatgtaaaattattccaatcctactgaaattattccaaaaaattgaggaggaggagatt

 3.01 Init +  44854  44938   85  0  1   88   48    80 0.373   5.16
gtggatcccgcaccgggaccacaggtggagctgcctgccagtccagccatgtgcccacac
tccccagcccttgggcggttggcgggactgggctccatggagcagggggtggtgctcatc
agggaggctcccgccacacaggagcccatggtggggggttggggtggggagggctcaggc
ATGGCGGGCTGCAGGTCCCAAGCCCTGCCCCACGGGGAGGCAGCTAAGGCCCGTGAGAAG
TCGAGCACAGCAGCTGCTGGCCCAG
gtgctaagcccctcactgcccggggcttgcgggccagccagctgctccaagtgcagggcc
gctgagcccacagtcacccagaacttgtgctggcccgcaagcaccgtgtgcagccctggt
tcccacccacgcctctccctccacacctccctgcgagctgagcgaacaggctctagcctt

 3.02 Term +  45096  45262  167  1  2   17   49   230 0.848   9.10
gagcacagcagctgctggcccaggtgctaagcccctcactgcccggggcttgcgggccag
ccagctgctccaagtgcagggccgctgagcccacagtcacccagaacttgtgctggcccg
caagcaccgtgtgcagccctggttcccacccacgcctctccctccacacctccctgcgag
CTGAGCGAACAGGCTCTAGCCTTGGCCAGCCCAGAAAGGGGCTCCCACAGCGCAGCAGTG
ACCTGAAGGGCTCCTCAAGCACGGCCACAGTGGGAGCCAAGGCCGAGGAGGCACCGAGAG
TGAGTGAGGGCTGCGAGGGCTGCCAGCACGCTGTCACCTCTCAGTAG
gagcactggggttgaaagctgcctatagtatactatgctcactacctgggtgacaagatc
attcatacaccaaacctcagcatcatgcaatttacccgtgtaacaaacctgtatgtgtac
tccctgaacctaaaatgaaagccaagataaaaactagttaaaaataaataaataaatcaa

 4.04 PlyA -  45843  45838    6                               1.05
 4.03 Term -  47929  47720  210  1  0   23   44   223 0.786   7.71
 4.02 Intr -  48297  48133  165  0  0   57   94   127 0.035   9.44
 4.01 Init -  56740  56588  153  1  0   11   76   121 0.009   3.52
 4.00 Prom -  66336  66297   40                              -7.25

 5.01 Init +  71708  71892  185  1  2   90  110   118 0.998  10.90
caagtctggattgaggaaggcagaaatggagattcaaacaccacgtcttctattatttta
ttaatcaatctgtagacatgtgtccccactgcagggagtgaactgctccaagggagaaac
ttctgggagcctccaaactcctagctgtctcatcccttgccctggagagacggcagaacc
ATGGCATTTTATAGCTGCTGCTGGGTCCTCTTGGCACTCACCTGGCACACCTCTGCCTAC
GGGCCAGACCAGCGAGCCCAAAAGAAGGGGGACATTATCCTTGGGGGGCTCTTTCCTATT
CATTTTGGAGTAGCAGCTAAAGATCAAGATCTCAAATCAAGGCCGGAGTCTGTGGAATGT
ATCAG
gtaagaagaggggcctaatctgccaatctcttctcttctgagtggttggagaaaagctgc
accaaacgcaaaataattttttcaaactttgtcctatcttttcaagaatagtgattgatt
ggtaatcatgctgaagcttattgcccccacaacctgccttttttttcctgaagacttctt

 5.02 Intr +  74599  74905  307  1  1  123   78   215 0.993  19.53
gtgagccaccacgcccggccatgtcatccccattttaacagagagggctctgtacagagc
atgccatgaagccagagagtagtaacagttcgatgattcaaacccagctttgccaggtct
ttactctaaagtcgttgactagaaagcttcccattttcttccacttcttctttcttccag
GTATAATTTCCGTGGGTTTCGCTGGTTACAGGCTATGATATTTGCCATAGAGGAGATAAA
CAGCAGCCCAGCCCTTCTTCCCAACTTGACGCTGGGATACAGGATATTTGACACTTGCAA
CACCGTTTCTAAGGCCTTGGAAGCCACCCTGAGTTTTGTTGCTCAAAACAAAATTGATTC
TTTGAACCTTGATGAGTTCTGCAACTGCTCAGAGCACATTCCCTCTACGATTGCTGTGGT
GGGAGCAACTGGCTCAGGCGTCTCCACGGCAGTGGCAAATCTGCTGGGGCTCTTCTACAT
TCCCCAG
gtactcaagccttctcaggcggggcactgggagcaggatcagaagaagcaggcttggggg
tgccatgcccaatagccatacggtttaccatattcccatctctggcacaaaagacctatg
atttagttgatatgctgtatcatgaccatttgggatttctgaaactccagtgtccacaat

 5.03 Intr +  79046  79930  885  1  0  125   96   887 0.847  83.78
ggagtggaacagatgctgcttttccttaccctttctttcatcctgtatacagtgaacagc
atagttgataaatgagaccaaggcatgctcagaaagccacctccacaacagcctggaggc
tcactcagcacctcttcactcactcactcactcattcaccatgttcttggttctctccag
GTCAGTTATGCCTCCTCCAGCAGACTCCTCAGCAACAAGAATCAATTCAAGTCTTTCCTC
CGAACCATCCCCAATGATGAGCACCAGGCCACTGCCATGGCAGACATCATCGAGTATTTC
CGCTGGAACTGGGTGGGCACAATTGCAGCTGATGACGACTATGGGCGGCCGGGGATTGAG
AAATTCCGAGAGGAAGCTGAGGAAAGGGATATCTGCATCGACTTCAGTGAACTCATCTCC
CAGTACTCTGATGAGGAAGAGATCCAGCATGTGGTAGAGGTGATTCAAAATTCCACGGCC
AAAGTCATCGTGGTTTTCTCCAGTGGCCCAGATCTTGAGCCCCTCATCAAGGAGATTGTC
CGGCGCAATATCACGGGCAAGATCTGGCTGGCCAGCGAGGCCTGGGCCAGCTCCTCCCTG
ATCGCCATGCCTCAGTACTTCCACGTGGTTGGCGGCACCATTGGATTCGCTCTGAAGGCT
GGGCAGATCCCAGGCTTCCGGGAATTCCTGAAGAAGGTCCATCCCAGGAAGTCTGTCCAC
AATGGTTTTGCCAAGGAGTTTTGGGAAGAAACATTTAACTGCCACCTCCAAGAAGGTGCA
AAAGGACCTTTACCTGTGGACACCTTTCTGAGAGGTCACGAAGAAAGTGGCGACAGGTTT
AGCAACAGCTCGACAGCCTTCCGACCCCTCTGTACAGGGGATGAGAACATCAGCAGTGTC
GAGACCCCTTACATAGATTACACGCATTTACGGATATCCTACAATGTGTACTTAGCAGTC
TACTCCATTGCCCACGCCTTGCAAGATATATATACCTGCTTACCTGGGAGAGGGCTCTTC
ACCAATGGCTCCTGTGCAGACATCAAGAAAGTTGAGGCGTGGCAG
gtgcgtccttcacttatatagcaatttgctgtataataaagcagagttgggctgcaactc
caggcaagaaaaatagtggtcatttgaaaagggcaatatttaaatgaagccactaaatgg
agctttggattcaaagtaccttttttaaatcttgagcaactgatttgaacaaaattgata

 5.04 Intr +  93330  93560  231  2  0  109   92   297 0.978  29.25
ctgctgctaacaccggcaagtactttggtgtgaattagaaaaagctgtctcttcctcaag
tcacgttcctcccactttgttggaacaagatagtctaccgttgttgtgcagggcacagcc
tacctaattagttctatgtggcagccctggggcttgtactcattctttgctcctctttag
GTCCTGAAGCACCTACGGCATCTAAACTTTACAAACAATATGGGGGAGCAGGTGACCTTT
GATGAGTGTGGTGACCTGGTGGGGAACTATTCCATCATCAACTGGCACCTCTCCCCAGAG
GATGGCTCCATCGTGTTTAAGGAAGTCGGGTATTACAACGTCTATGCCAAGAAGGGAGAA
AGACTCTTCATCAACGAGGAGAAAATCCTGTGGAGTGGGTTCTCCAGGGAG
gtaggtgctgtccatcagaaaaccagatgtctccaccaggggcaggaaactgtgctgggc
tttgggagggcctttggtttccccactggacttccaaaataaagagtccacttccctgaa
ctctctggcctttgcaatcttggggctccctgtgaaatccacagtgtttagtgtaaagag

 5.05 Intr +  99631  99754  124  0  1  131  110    86 0.998  14.34
cctttcacagatatcagaaccaaggacctctggacctccctttgcctggaatgggcccaa
cgtctgtcacactgattcttgtgcccaaactcctccctcttacatgttttgaagagacag
tagggctggcccctgaccctacaactacagccactcacctttgtgctgtctgtcctccag
GTGCCCTTCTCCAACTGCAGCCGAGACTGCCTGGCAGGGACCAGGAAAGGGATCATTGAG
GGGGAGCCCACCTGCTGCTTTGAGTGTGTGGAGTGTCCTGATGGGGAGTATAGTGATGAG
ACAG
gtaagggaacccctcttgggcactgtgcagggcttggtccacttcggaggcctggggtca
gtgaagcccatggaagggctgggctgagatggtgctttgcacagtttctcatttaacaaa
ggtatatctgagcatcacaaaatgttgggcatggaggtggaacagaaaaagaatgttaga

 5.06 Term + 101205 102709 1505  1  2   63   38  1823 0.994 164.49
ttaaacatgtcggggttcagcatatttttgataatgtaaaaatcagaatgatttcatcaa
aatggagaaaatatgtagtgaccacatccaaaaaactatgtattcccaccaccacatgta
cactcacacattttagtctgtgccacacaataactcactcttcactgggacattttacag
ATGCCAGTGCCTGTAACAAGTGCCCAGATGACTTCTGGTCCAATGAGAACCACACCTCCT
GCATTGCCAAGGAGATCGAGTTTCTGTCGTGGACGGAGCCCTTTGGGATCGCACTCACCC
TCTTTGCCGTGCTGGGCATTTTCCTGACAGCCTTTGTGCTGGGTGTGTTTATCAAGTTCC
GCAACACACCCATTGTCAAGGCCACCAACCGAGAGCTCTCCTACCTCCTCCTCTTCTCCC
TGCTCTGCTGCTTCTCCAGCTCCCTGTTCTTCATCGGGGAGCCCCAGGACTGGACGTGCC
GCCTGCGCCAGCCGGCCTTTGGCATCAGCTTCGTGCTCTGCATCTCATGCATCCTGGTGA
AAACCAACCGTGTCCTCCTGGTGTTTGAGGCCAAGATCCCCACCAGCTTCCACCGCAAGT
GGTGGGGGCTCAACCTGCAGTTCCTGCTGGTTTTCCTCTGCACCTTCATGCAGATTGTCA
TCTGTGTGATCTGGCTCTACACCGCGCCCCCGTCAAGCTACCGCAACCAGGAGCTGGAGG
ATGAGATCATCTTCATCACGTGCCACGAGGGCTCCCTCATGGCCCTGGGCTTCCTGATCG
GCTACACCTGCCTGCTGGCTGCCATCTGCTTCTTCTTTGCCTTCAAGTCCCGGAAGCTGC
CGGAGAACTTCAATGAAGCCAAGTTCATCACCTTCAGCATGCTCATCTTCTTCATCGTCT
GGATCTCCTTCATTCCAGCCTATGCCAGCACCTATGGCAAGTTTGTCTCTGCCGTAGAGG
TGATTGCCATCCTGGCAGCCAGCTTTGGCTTGCTGGCGTGCATCTTCTTCAACAAGATCT
ACATCATTCTCTTCAAGCCATCCCGCAACACCATCGAGGAGGTGCGTTGCAGCACCGCAG
CTCACGCTTTCAAGGTGGCTGCCCGGGCCACGCTGCGCCGCAGCAACGTCTCCCGCAAGC
GGTCCAGCAGCCTTGGAGGCTCCACGGGATCCACCCCCTCCTCCTCCATCAGCAGCAAGA
GCAACAGCGAAGACCCATTCCCACAGCCCGAGAGGCAGAAGCAGCAGCAGCCGCTGGCCC
TAACCCAGCAAGAGCAGCAGCAGCAGCCCCTGACCCTCCCACAGCAGCAACGATCTCAGC
AGCAGCCCAGATGCAAGCAGAAGGTCATCTTTGGCAGCGGCACGGTCACCTTCTCACTGA
GCTTTGATGAGCCTCAGAAGAACGCCATGGCCCACAGGAATTCTACGCACCAGAACTCCC
TGGAGGCCCAGAAAAGCAGCGATACGCTGACCCGACACGAGCCATTACTCCCGCTGCAGT
GCGGGGAAACGGACTTAGATCTGACCGTCCAGGAAACAGGTCTGCAAGGACCTGTGGGTG
GAGACCAGCGGCCAGAGGTGGAGGACCCTGAAGAGTTGTCCCCAGCACTTGTAGTGTCCA
GTTCACAGAGCTTTGTCATCAGTGGTGGAGGCAGCACTGTTACAGAAAACGTAGTGAATT
CATAA
aatggaaggagaagactgggctagggagaatgcagagaggtttcttggggtcccagggaa
gaggaatcgccccagactcctttcctctgaggaagaagggataatagacacatcaaatgc
cccgaatttagtcacaccatcttaaatgacagtgaattgacccatgttccctttaaaatt

Predicted peptide sequence(s):


>CASR_1|GENSCAN_predicted_peptide_1|121_aa
MGRQDTDMGPEQWQILVRRDNHVEEMRNLFSGGGLSLSATTAAIVRSQYDLSHKGYQTGD
LGTTAGVSEYTVPTQHLTCSWDPTGALSSRPPWVPRSYLRRGQGSLAQRQLRPLGRGSPR
G

>CASR_1|GENSCAN_predicted_peptide_2|67_aa
MDRPLARLIKKKEKIQINTIGNDKSDITTNRTDIQKILSEYYQNLYAHKLENLEEMDKIL
EIQASQD

>CASR_1|GENSCAN_predicted_peptide_3|83_aa
MAGCRSQALPHGEAAKAREKSSTAAAGPAERTGSSLGQPRKGLPQRSSDLKGSSSTATVG
AKAEEAPRVSEGCEGCQHAVTSQ

>CASR_1|GENSCAN_predicted_peptide_4|175_aa
MLPGLGLTLQGNGLPSGPWQVQKCCLGAYTWARDPRARLVLHTLVAELVPKLLPSLGFGV
FSCKMTKWYHGLGGSQEAPSMQVEPQWKRLDLEVGSLPGSFPSPAQAVLEQKDLGSIFTP
DVAAASARRRGCFVMRGAKGAFSLDLGSGPHREASSLPLLYWSMRVTPSNSCRQA

>CASR_1|GENSCAN_predicted_peptide_5|1078_aa
MAFYSCCWVLLALTWHTSAYGPDQRAQKKGDIILGGLFPIHFGVAAKDQDLKSRPESVEC
IRYNFRGFRWLQAMIFAIEEINSSPALLPNLTLGYRIFDTCNTVSKALEATLSFVAQNKI
DSLNLDEFCNCSEHIPSTIAVVGATGSGVSTAVANLLGLFYIPQVSYASSSRLLSNKNQF
KSFLRTIPNDEHQATAMADIIEYFRWNWVGTIAADDDYGRPGIEKFREEAEERDICIDFS
ELISQYSDEEEIQHVVEVIQNSTAKVIVVFSSGPDLEPLIKEIVRRNITGKIWLASEAWA
SSSLIAMPQYFHVVGGTIGFALKAGQIPGFREFLKKVHPRKSVHNGFAKEFWEETFNCHL
QEGAKGPLPVDTFLRGHEESGDRFSNSSTAFRPLCTGDENISSVETPYIDYTHLRISYNV
YLAVYSIAHALQDIYTCLPGRGLFTNGSCADIKKVEAWQVLKHLRHLNFTNNMGEQVTFD
ECGDLVGNYSIINWHLSPEDGSIVFKEVGYYNVYAKKGERLFINEEKILWSGFSREVPFS
NCSRDCLAGTRKGIIEGEPTCCFECVECPDGEYSDETDASACNKCPDDFWSNENHTSCIA
KEIEFLSWTEPFGIALTLFAVLGIFLTAFVLGVFIKFRNTPIVKATNRELSYLLLFSLLC
CFSSSLFFIGEPQDWTCRLRQPAFGISFVLCISCILVKTNRVLLVFEAKIPTSFHRKWWG
LNLQFLLVFLCTFMQIVICVIWLYTAPPSSYRNQELEDEIIFITCHEGSLMALGFLIGYT
CLLAAICFFFAFKSRKLPENFNEAKFITFSMLIFFIVWISFIPAYASTYGKFVSAVEVIA
ILAASFGLLACIFFNKIYIILFKPSRNTIEEVRCSTAAHAFKVAARATLRRSNVSRKRSS
SLGGSTGSTPSSSISSKSNSEDPFPQPERQKQQQPLALTQQEQQQQPLTLPQQQRSQQQP
RCKQKVIFGSGTVTFSLSFDEPQKNAMAHRNSTHQNSLEAQKSSDTLTRHEPLLPLQCGE
TDLDLTVQETGLQGPVGGDQRPEVEDPEELSPALVVSSSQSFVISGGGSTVTENVVNS