10 KB upstream the 5' end of the gene( Copy and paste the sequence to use a program below, blastn and mask excepted)
Mask the 5' upstream region with RepeatMasker	Unmask
Promoter prediction	BDGB : Neural Promotor Prediction
	BIMAS : Promotor Scan
	CBS : Promotor prediction V2.0
	MIT : MC Promoter MM. II
CpG islands prediction	EBI : CpGplot
Signal prediction	BIMAS : Signal Scan
Blast 10kb upstream human, mouse, rat genes database (more sensitive with masked sequence)
>C21orf41 16618807-16628807
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
ATTTAGAGTATTAAAATACAAAGGATAATATCACTATATACATACTGTCA
ATATTTTATTTTCTGAAGTAAGGCATATTTAAAGAGAGCTTTGGTCAGTA
AAAGTATAAAATCTGAGCTTTGGTAAGGGTACAGTTTATAAGGCCTAGAG
AACATCAAAACATTCATTTCATATTGAATGTATAAATACCCACATGTGAG
AGCACATGTTGATTCAGTTTGAGTATGTCTGCCTTGTGGATCTTTAAAAC
CTTTCCAGCCTGTGTTATTTTCCCAAGCTTTCTTTATAATTACACCAGGG
AAAGAGTTACCTGGCATTAATCAAAACCAGACAGTGGACAATGACAAAGA
GCTAGCATGAAGAAATATTTCTCTTAGAAATTCCTGGAGGGAAAACAAAA
ATTGATTAGGGAAAAAGTTCACTGAGTTTTGTTGAAAGGTGAAAAAGATT
GAAAACAAGTAGGGACATACAAAAGCAATTATTTTTTACATGGTTTATCT
AGGGACAGCAAATGTTTAAGCCAACAGAAAGATAAAATAACTGTTTCAAA
TTTAGCATCAAAAGTATTCAGAATATATGATCTATTGAAAGGTATAAAAA
TCCTTTAAGGAACTGTGTAGAGCAAAATGGTTAAATACAGAGTTAAATCT
CGAAAAGTAAAACCTCAATTGAATCATCTTAATGATAGCACAAAGGTTTC
ATGCCTCCAGGCTCTGTATGTAAGCAATCTTTCCTTTCAGCATTATTTCT
AGAATTCTCTTTAACTTTCTCATGCCTTTAAAAATAAATTTAATAGAACT
TTTAAAGTATTTTTCTTCATTCCTAAGGGTTTCACAATCTTTTTACTCCA
CTGTTTTTTATTTGCTATGATAATTCTTTGCTGACTTTTTTATGTTTTGC
TTATCCAAATATTCTAGGGGTCAAATATCTTGAGACCATTTTACAATTCC
TATGGAAACATTTTACACATCATTTGAGCCATTACTTTTGTTATAAATCA
AGGAAAATGGCTAAATAACCATTTTATGTTGCTTGAAATAGGGATAAAGT
TAAACTAATATTAAAAATTATCTTCCTCTCTTTTAAAAGTAACTTTATAA
ATAATTAGAAAACATTCATTTACAGAACGGCTTTTATATGGAAACCTTCC
AAGAATAGAACACTAGGCAAAACTAAAAGTACACTTTAAAGTTCCTAATT
TTTGTCTGCCTCTGGGACATACAGAAATCTGAGACTGACCTACACCTCTT
GTGAATTCAGTGATTCTCAAACTTACCTTGCAATCACAAAGAGTACACAG
CTGACTCCCAAGCAGGCTAAGAGCACATACATCCAAATATCTGGAGACAG
GGGGTTGAGGAAGGAGAAAACGCCTGGATTGGTACCATTGGGCTTCCGGT
AGAGAATGCTGATGCCTAGGGTCATGAAGGGTTTGGAGAAGTCAATGACT
TTCTCCCGCACGTAGGTGATGGTAAGAGGAGCCACTGCCAGGTCAGCCCT
CTGCAAAAGCAAGTCCAAAATTGTCAGCTTAGTCTAGTTTCTTTGCAAAT
GTCTAGACTTTTCCTGGGTACTCCTGATTCTTATTCTCAACTCTAAATGC
TTCTCATTCATGAAGCTCCTGTGATGGTTGGTTCTAATAAAAAAAAGCCA
ATTTATACAGTTATGTTTATGAAACAGTATCAGCAAAGAGAAACCAGAAA
GTATAAAACACACATATACATACACAAATATATATCCATCATTCTGGAAC
TAAAGACAAAAATGCAGGAAGATGCCTTTAAAAAGGGCATGTGAGAAAAA
GAAGGAATGAGCAACTTGGTTGTACTATTAATTGACATGATGAGATTTTG
CTCTGAGCTGAAAACTTTAAAATTCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TAAAATTCTTAATTTAAGAATCACTCAAGTTTATGTTCAGTATGAAAGAA
GGATCCATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTATTGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCCATATATTTTTATCATTAATTTTTATCTTTACTTGCCCTTCTAAGTA
AGCAAACTCCATTTCCAGGCTGTTTTACTTTGCTTCTTAAAAAAATTGTT
ACGATTCAAAAAAAGGAAACATTTCTTCTGACATCATTTTTTCCTCTCTT
ACTTTCTCTTATGCATATTTTCAGATATGTTAGAAATATTGTTACTTACG
TGATCTATGAGTTCTTTAACCATCCCGTTCCACTCCCCTTTGTCATTCTG
GGCCCCATATTTGCCATCGGGAACTAGTTTAACATCATAAATGAAACCCA
GGATGTTTGACAATTCTTTCAACAGGTCTAGGCAATATCCTTCAAATCTG
TCATTTCCATATAGAGGCTTATCAGATTTCCTGTACATAACATAGGGTTC
TTCCTAAATGAAACAAACCAAATATGAAAACCCTGTTATAATGAAAGGAA
GAGTTTACCCTATCAGCAGCTTGAAGATGTGAAATGTTTGATAATGATTT
TGAAGAGCTGAGAGTACTGAAGTCATTCACTCATCTGCCTGCCTATGTCC
TCTATAAATACAAAACACTTCCTATATTATTGTTTCTTTCCCTTCTGCGT
CTTTCGATGGGAGCTTTTCCTTCCGCTGTGGAGGGTGGGGCTGTGCGGGA
ATGGTGTGATGGATACACAGTCACTGTTAAATGTTGGGTCTGAGAAGAAG
GAAGGCGCAAAGGGAAATGGGGGCCCACATGCCTGGCCACCTGCTGTGCC
AATACCTAAGCTTTTTTTTGTATGACCCTTCTGGCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTGGCTTTTATCTAAG
AACCTCATGACAGAGAAATCTACATCACCAACTATTTCCTTTCATTCTTT
GCATTTCCTATCTATGACTATTCTCATTTCTTTATCTAAATTTCATCTGA
ATTTCACTATTCACTTATGATTTATATATTTTGATTGGTTTCCTTCAGGG
TAGCCTATTCCAAAGGCCATTTCTATTTCTTCTTTTATCATCTTTCCCAT
TTTCTTTTTTGAAATCACCTCAAATCTCACATCTGGTCATTCTCTGCTTA
TATACGTGCATCATCAGTCCCCTCTCCTATAAATAATGGACACTTCCCTA
CTACCATGCATCTATAACCTTGTTAATTCTCATTTGACTAAATGAATCCT
CATTTGGTTTTATAAAATATAATAGTTGCTATACTACAGACATATTCTTT
ATATTTAGGTTTATCCTCAAACTGATAATGGGGTCATTCAAACACAGTAG
AGAACCCTGTGTTTTCATAAGACAGTCATAGAGAAAGTAGTAACCAGAAG
AGCAAACCAGTTTTTCCTTTGGATGAACAATTCTCACAAGTTAATAATAT
CAACAATAAATTGATTTGACATTATGGACTGGTGTAAGGCAGGATGTCTG
CAAGCAAGGATTTCAGGGAAGGCTACTCCTGCCCAACTCCCTGGAGAAAG
GAAAAAGCGGAAAATAAGCAACCGGTAGCTGTACAGTGGCTGGATGGGGC
ATGACCAGGGCACTAATAGGAGGCAGGACTTTCAAGAACAGTTAGTAAAG
GAGCTGTGTACAGAAGTGTGAGCAGAGCAAAGGGAGCCAAGGGAGGTGGG
GGTCTGATTTGGTGGCAAGTCATAGACACACAGGCAACAGCCTCTTCAGG
AAACCTGCACCACCCAGGGCTGAGGCAGGAGGGAGGAAAGAATACTCCTG
AAGCTCAGTGCAGCTGGACCCTAAAAACAGTGCCACTGATGGGCAGAAGC
TATGGTTGTAGAAAGTCAGAGGTTCTGAAAAAACTACTAGTAGCAGTTGG
GAGGGAACAGAAGAGCTTCTCTTGCCTCTCTTCCCCCACCTCTTCCCCCA
CTTCCCTAGTCTCTTGCTAGGGTCTCCACATGGTTGAAACCAACTAGCAG
CCAGAGAGCAAGGGAGACCAGCTGGGAGGGGACAGAGAGTGGGGCTGAGC
AGGACTGGCAATGGATTAGAGGTGGGAGATCTTCAGAACAACGTTGGAAG
CGTCTAATTCAATCTTCCTGTAAGTATGTACAAACACAGGCTTTTAGTGT
CCTAGTTAAAAATAGACATTTGCAGACAGAAGCGTTGGCATGAAAAAGAC
AGTTGAGGAATGCTTCGAAGTCTAAGGCAGGAGCCTGGATAAGACACCCT
CAATTCCATGAAGTCAACTTACCAGAATGGTGGTGACAATGAGTGTTCTG
TTGGCCAATGAATCAGTGATATTGCTGGACTTGTCTTTGTTGCTGTCCGT
CATGTTAAGCCCACTGTTGGAATTCCAAATCCCAATCTACACAGAACACA
GTACATCAGAGGCTGCTGGCTGTCAGTGTGGCATTTACACCAAAGAGAGG
CCCCTTCTCTACCAGGAATGGGCACAAAAGCTCACAGTTTGGGACACTGG
GGCATCACAGTGGAAGCTACTAAACGTGGGGAAATGAAACAACAGAGGAA
TGAATGTGTAGACAAAATAGGATATATCTGTGCTATTGGGGGCAGGGTAG
GTGGAGGTCTTTTTCTTTTTCATTTAGTAAACTCATTTTCTTTTATAAAT
GAAAAAATATATAAGAATTCTTAAATGAATATCAGATTTTTCTTCCTATA
TATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCTTAGGCTGCCAAAGTAGTATCACTAGT
TTATTTAAAATTTATGAATAATGGGGTGAAGGGGCAGGGTGAATGGTGGA
GAGACCCAGCATCTAAAAGGGAAAGATAGTGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGTAATTTTTTCTTTAAAAAGAGAAAGATAAATG
AAAGAAAACATGTCATGTGCATGAGAAGTAGACTAAATTCAGGGCCTATC
TTCTTTGAGGAGCCAAAGCTGGGCAAAGAGTGCTTGTGAGCCCTAGCAGG
ACTCTGTTCATATCTCTGTCACAGCAGCTAGCGTCTTCTGTTATTATTTA
TCTGTTTACCTGTCTTGTCTGTCCACTTGATCGTGAACTCCTTCAGTGAG
GATGCTCACTTTTACTGGTCACTGATTTTACTGTCACAAAACCAACCATG
GCAACTGGCATTCAGTAAAGCCCATTACTCTTTTTAAAAATAATGATCCA
CAATTTTCTCCAGTGGCCAAGTCACTCCTGGGTTGTGAGGTGGTGTAGAA
GTGTATTGATTCATTCAGCCTCTGTGGGAACCCAGAAGAGGAGCCTTGGG
GATTTTGAGCTATTTTGTAAATGCCTATCTTTCTGTAGGCATTTACTGCC
AGCCTCACATGGTGGCTTGCAAGTATGTTTTAGAGCCAGGAAGACCTTGT
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNATTTCACAGGAATAATGAGAAGATCAAATAATCAG
ATGATGTATGTGGAAGTGTTGGTGCATGTTGTTAAGACCTGCACACATAG
TAACAAGAAAGGACATTGAAATGGCTGCCTCAGTCATTTCTTCAACCTTA
CCCTGTCATGAAGGAATCTGGACTCATTTTTTTAAAAATTCAGATTCTGA
TAAGGTAAAAGAGCTATGACAAGTGGCAGTTTAGGAACATGAACACTTGG
ACCCGCTCTGAGATGGACAGGGTGGAGCTATGCTTGGTCCCTAAATATGT
TCCTCTAATGGGAAGACAGACAGGAGTGTTAGGCTCCATCCTCCTTTGCT
TTTCTATTTCTTGACTCTGATTTATTGCCTATATTTAGCAGCTGGAAATT
CATTTAGCTTGACAAATATCCCTTTTAGAGACATCAATGCTTTGAAAAAG
TTTCAAGGACTATTACACGTTCACACATCAGTGTGAACTATTTTAATTTC
AGTTTTATTTCCTATACTTAATGAGGGTTAGTTGACTGGAGAAATAAAGA
GACAGGTATAGGTAAATGGGGGAATGGGATAGTTTTTGCATTTGAAAATA
TTGTGGTCCTGCCTGAAAAGAAGTGTCTATTGGGTTGTAAGCTGTACTCT
TAATAACCATCCAACGTTTCCAGGATCTAGTGTGATAAATATCACCTAGA
ATGCACATTATACGTCTAATGGTTGAAGAATCTTTAGGTTTCTTAATCTG
GCTTTAGACTCAGGAAAAGTGGACAGCATTTTCTTCTTTTTCTTCTCAAT
CTCCATCCCTTCTTCTGAGGCAGGGACCCTTGCTTCTAGGAAATGTAACT
CTGGCTAAATATACCTGTCTATTGATTTTCATCCAAGGCTGTGCTTTAGG
TTGTGAACAATTGACTCCTAGCTCCATGAAGAGTGTGTGTAAATTGGGCC
CTGACTGTACTTCTAATTAAACCTTCACTTAGACACTGAGGAGAAGGGAA
TCTAATTTTTAATTAAGTAAGTATTGAAGGGTGGAGAAAATAACTGTTTT
TAGCCACTTGATTAAGTGATAGGATGTGGTCTCTTTAAATCTTATTTCTA
TTAATGTCAAGTATGTGAGTGTTGGAGGAACTACCGTAATATTTGAAACT
GACAGTGTTCAATAGCCTAGCAATATCACTCTCTTGTAAAATAAAACTTG
AACTTGTAGACAAATACACCCCACAGCTTGATGTCTGGTTTTTCTTTCCT
TTGCTATCTGCACTAAAAGTGCAGAAGCTAAGAGATCATTGCTGCTGCCA
ATCCAATCAACTAAGTCCCAAGTCCTATTCAGTTTAAACTTTCCTTCTTA
AAATGAGAAAAGGGTGACCATTTTTTCCCCTATTGTCTCTACAGAGGGAC
CTACAGAAGGTCCTTTAAATGTAGACTAGAAGAGTATCAAAATATAGTAA
AGGTCAGGCTATTCCTGGGAAATGTACAGTATATATATGCTGAGTGACCT
CAGTCTTCTGTTTCCAAACCTGTAATCAGCAAAACAGAACNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTGTGTCTTTTAA
ACCCAAGTAGTCATGTGGCTTTATCTGTTACTTGAAGTAAATGAATATGT
TCTCAGGAAATGAATGTCTCCCTTTAAAGAAGTCAGATCTCATGATTCAT
GTGTGCTGGAGACAGAGGTACAGTTAAGAAGATGCCTGGACATTTGACAT
TTCAGTACTGTTCTACGAACTAGGAGGAGTGCCTCCAGGGAGCGGAACCT
CAGTTTTCAAGCTTCACAGTGAAAGCAGACAGTAGTCATTTACCAGTGAG
AAGTAGTGGAGGGTGGATCAGTTACTTGTGGGGAGGAGCACTCAATATCT
AAATTACCTGGCCCTGATTTCTTTCACTTTGTAAGCTGGCACAAGGGAGC
AGCCATGTGTTATCTAGGACAACTGAGAAAAGCATTTGAAAATGAGTGCC
CAAATGACATTAAGCAAACTTTTTTTAAAAAGCGATGCAATAAAAAGGGT
ATTCAGAGAGCCACTAGTATCTATCTTCTAAACCTAGACAGTGATTCATG
TAAACTCAACATCTAAAGTGGCTGAGGGAAATAATCAGGTATCTAGGGCA
AAGATAAAGGTATATGTGTTTCCTGTATTACGAACCTTATATAACAAATA
TTTTAGTGAGGGATGTTGTAAAGATTGCTACCTTCCTCTTTTGGAAAGAA
TTTTGGGTGAATAATACTATTCTAAAATAAGTCAGAGTACGAGGAAAGCT
TTTGGGATTTCAATATGATGAAGGTGAATTTTTGTTTAAGTTGGAGACTT
CTGGAAAAAGTGCAATGTGTTTGTTGGGTCTGAGTGGGTCGCCTGTGCTA
GAACTCAGGTTACCGTGAATTTTTGACGGAGTTATAACACAAAACAGCAC
ACCACAGTATATACAACTTACAATGTGGAACATGATGGGCTACCAGGAGG
GAAGAGGCATGAAGGCATGGAGGATCAAGATCAGAAAGTTACAACCCTCG
GGAGTGTGTGTGGCTCTTGCAGTTTAGTGACAAATAGAGGACATCCCCCC
TCCCCTTTATATAATTTCAAAGCTTGGATTCCATTCCCTGGGACATTTGT
ATTAGATTAATTCAAAGTGCCCAGAGTCTCAAGATGGATTAGTGTAATAG
GNNNNNNNNNNNNNNNNNNNNNNNCTGGGTGCCGGTTAGGTTCATCTATT
TACCAGTAAAATTTTAGTGAGGAAACCAGATCGCCTTCTACATGCACTTA
GTAGCCTTGTTCACTGAAGATTAAAACAAGGCTTTTAAACCTATGCTTTG
AAAACTTAAAAAGAAAAAATTTTTGAATTCATCACTGAGTACTACTAAGA
GGGGGACAAGGTTTTTGGCTACAGGGAGAAACTTGTGTACACTTTCTGTG
ACATAGCTGATAATTTGAAAGATGAAAGTGAACCTGACAAAACTGTTCAA
GTTGAACAACCTGAAGCAATTTAAGGTCCATTCATCAGTCCATAGATTTT
TTTTACCAAGTAGTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTGAAAGAAAATGTTTGCTTACCAC
GGGGACATTTCTCTGATCCAAATGTTTTTAATGTCTCATATTTGCTTACA
TAAATCTATGCACATTCATTGGCAACATGGCACTGTATAATAAACTATAA
AATAGTGGGTGTTATAATTCACAAGATAATCTCATTTCCTTTCCAAGGTC
CCTAACGTTTGTGTCCTCTTTAGAACTGTGGCTCTAAAACAAATTGCAAG
ACAGTATACTCTGATGAAGATATCACACAAAACAAAAGATAGCTCATGAG