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GrailEXP v3.31 [March, 2002]                   http://compbio.ornl.gov/grailexp/

Authors:  Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and 
  Edward C. Uberbacher, 1996-2001

Reference:  "Automated Gene Identification in Large-Scale Genomic Sequences",
  Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4,
  Number 3, 1997

Sequence:  >GrailEXP Input Sequence (4827 bp)
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PERCEVAL Exon Candidates (3 predicted)

 Index Std   Begin       End     Frm    Type     Len    Scr    Quality

Exon  1 +       1310       1375   0    Initial     66   100   Excellent
cccgcgcgtcccttcttgcggggccaccgcgaccccgcaggggactccgaagccaaagtg
cctcctccccgccccttggttccgcccgcgcgtcacgtgaccccagcgcctacttgggct
gaggagccgccgcgtcccctcgccgagtcccctcgccagattccctccgtcgccgccaag
ATGATGTGCGGGGCGCCCTCCGCCACGCAGCCGGCCACCGCCGAGACCCAGCACATCGCC
GACCAG
gtgggtgggccgcggggacggggccggcccggagtcctgccttagcctcagggcgcggcc
gcggctcctggagcgaaagaagccgctttggccccgctgcgcacccctgggctggcccgg
gctgtggccgtgagaggcctccctccgctcgggcgctgcgcgcgagtgagcagcgggggg

Exon  2 +       2820       2891   0   Internal     72    88        Good
aactgtttttttctactttattattaggctgacagtttaaatgtcccttcagttgtaaga
gacaattgtgtgaagagccagtgtcagaatcgtgtgtgtgctcacatgcgtgcaagttac
tctagcaggagggaatccaagaagccactgagacatcctcattctgtcccttctgtctag
GTGAGGTCCCAGCTTGAAGAGAAAGAAAACAAGAAGTTCCCTGTGTTTAAGGCCGTGTCA
TTCAAGAGCCAG
gtggtcgcggggacaaactacttcatcaaggtagagtgtgggcctcaggagggcctgccc
cgaacgggtgctggtaggaaaccgcctgtgcaggcccgggctgtgtggtcttaggtgctg
gggcgccctgtggctgccccctgagataagcatcctactgtgtgtgtccatcggcctttc

Exon  3 +       3249       3377   0   Terminal    129    90   Excellent
ttcaggaggactagggcttctggggagctaagaaccccaaggaaacaagtgtgggatgtg
aggcatcccctgcacatgcaggagaagacaagattgtcttcagctggctgctaatgacct
ggaggggcgcagcaaggtgacttgggatcagaggcttcgctcactccgctctcttcccag
GTGCACGTCGGCGACGAGGACTTCGTACACCTGCGAGTGTTCCAATCTCTCCCTCATGAA
AACAAGCCCTTGACCTTATCTAACTACCAGACCAACAAAGCCAAGCATGATGAGCTGACC
TATTTCTGA
tcctgactttggacaaggcccttcagccagaagactgacaaagtcatcctccgtctacca
gagcgtgcacttgtgatcctaaaataagcttcatctccgggctgtgccccttggggtgga
aggggcaggattctgcagctgcttttgcatttctcttcctaaatttcattgtgttgattt

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