-------------------------------------------------------------------------------- GrailEXP v3.31 [March, 2002] http://compbio.ornl.gov/grailexp/ Authors: Doug Hyatt, Manesh Shah, Victor Olman, Richard Mural, Ying Xu, and Edward C. Uberbacher, 1996-2001 Reference: "Automated Gene Identification in Large-Scale Genomic Sequences", Xu, Y. and Uberbacher, E.C., Journal of Computational Biology, Volume 4, Number 3, 1997 Sequence: >GrailEXP Input Sequence (3988 bp) -------------------------------------------------------------------------------- PERCEVAL Exon Candidates (2 predicted) Index Std Begin End Frm Type Len Scr Quality Exon 1 + 373 579 0 Initial 207 61 Marginal acttcatttcacctggtatgctttacaccaaaggctgtggggttttgtgctcaaagctac cgggtgagagacacgaatgcctgcagggttctaaataggcagaaaacaagctccaggcct tgctggtgtttctggcttgcttggaaacaaagctaaaagtcggagattctggctacaaat ATGCTCCCCAAGCGCCAGAGGCTGATTAAGGGCAGCTGCAGAAGTCATCAGCGGGTAATA ACTCTTGTTCCCCTGTCTTCCTCTCTGGCGCGGAGTCCAGGAAGACAACAGCAGCACCTC CCCTCCCCACCCTCAAGGGAATCTGCTGGCCATTCGGTGCGGCAAAGCATTCTGGGTGAT GTGGACATGACGCTGCTCCTCTACGCA gtgaggctccctcggtctgaccaagggtccaggttgcagtgaacctgtccaaagtgtggg ctggcctcgatgtttaaaattagcctgagaccagctcctggcaaggccggtttttgcacc accgctccccccatccacaacccagaaatctaaggacacgcagcatgcattttccttgtc Exon 2 + 1330 2337 0 Terminal 1008 90 Excellent agaagaaaaaagaggcgctaccctgcgctcccgggaggcctctgaaagcttccactagag aaaaactccccactcttacaatttctttaaccgcaagaagcggaggacctggacaaggac tcgaggagcaaggtggcgaaccaagggtagggcgcaccgggcccgagaggtcccccgcag GTTGCAGATACGGTGGACTCTCTGCGGCTTCTGAGCACGGAGGGAGCTGTCGCGGGGTCG GGAGGTCGTCTCTCATCCCTGCCTCATCTTCCGACGGCCGGCGGGGCCATGTCCAGAGGC CCGAGCTCCGCGGTCCTGCCTAGCGCCCTGGGATCCCGGAAGCTCGGCCCCCGGAGCCTC AGCTGCCTGTCGGACCTGGACGGCGGCGTGGCCCTGGAGCCGCGGGCCTGTAGGCCCCCT GGGAGCCCGGGCCGCGCGCCGCCGCCAACGCCAGCGCCGTCGGGCTGCGACCCCCGCCTG CGGCCCATCATCCTGCGGCGGGCGCGCTCACTGCCCAGCTCCCCCGAGCGCCGCCAGAAG GCCGCGGGCGCGCCGGGCGCTGCGTGTCGGCCGGGCTGCAGCCAGAAGCTCCGCGTGCGC TTCGCCGACGCCCTGGGCTTGGAGCTGGCACAGGTCAAGGTGTTCAACGCGGGAGACGAC CCGTCCGTGCCGCTGCACGTGCTGTCGCGGCTCGCAATCAACTCGGACCTGTGCTGCAGC AGCCAGGACCTGGAGTTCACCCTGCATTGCCTGGTGCCCGATTTCCCGCCGCCCGTCGAG GCCGCCGACTTTGGCGAGCGCCTGCAGCGGCAGCTCGTGTGCCTGGAGCGTGTCACTTGC TCGGACCTTGGCATCAGCGGTACGGTGCGCGTGTGCAACGTGGCCTTCGAGAAGCAGGTG GCTGTGCGCTACACTTTCTCGGGCTGGCGCAGTACCCACGAGGCGGTGGCGCGGTGGCGC GGGCCCGCAGGCCCCGAGGGCACGGAGGACGTTTTCACCTTCGGCTTTCCAGTACCGCCC TTCCTGCTGGAGCTCGGCTCCCGCGTGCACTTCGCGGTGCGCTACCAAGTGGCGGGTGCC GAGTACTGGGACAACAACGACCACCGAGACTACAGCCTCACATGTCGCAACCACGCGCTG CACATGCCTCGCGGGGAGTGCGAAGAGAGCTGGATCCACTTCATCTGA gccgcgcggggaccggccacctggagcctccacacctaagctgcgcctcctgtcatttcc ctgctgggctctcacatctatctggttgttcttcaccaccctccaagtcctctgacctaa ttttctgctgcaaggtcccctggcagtggcccatcctgtcttctacttgaaacgtctgag --------------------------------------------------------------------------------